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Nucleic Acids Symposium Series 2005 49(1):127-128; doi:10.1093/nass/49.1.127
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© 2005 Oxford University Press

Development of new N-unprotected phosphoramidite building blocks having a silyl-type linker

Akihiro Ohkubo1,3, Katsufumi Aoki1,3, Haruhiko Taguchi1,3, Kohji Seio2,3 and Mitsuo Sekine1

1 Department of Life Science, Tokyo Institute of Technology, 4259 Nagatsuta, Midoriku, Yokohama, 226-8501, Japan, 2 Frontier Collaborative Research Center, Tokyo Institute of Technology, 4259 Nagatsuta, Midoriku, Yokohama, 226-8503, Japan, 3 CREST, JST

New silyl-type linkers 2 and 3 were developed for the synthesis of oligonucleotides having base-labile functional groups in the phosphoramidite method without base protection. These linkers could be introduced into polymer supports in high yields and easily cleaved under neutral conditions. Particularly, the use of the N-unprotected phosphoramidite building block 3 having a silyl-type linker enabled us to synthesize oligodeoxynucleotides without protecting groups for the amino groups of 3'-terminal deoxyribonucleosides.


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