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Nucleic Acids Symposium Series 2007 51(1):55-56; doi:10.1093/nass/nrm028
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© 2007 Oxford University Press

Polymerisation of a DNA strand using oligo-DNA template with modified bases, sugars and phosphates

Jun-ichi Nagashima1, Satoshi Minezaki1, Satoshi Obika2,3, Takeshi Imanishi2, Masayasu Kuwahara1,3,* and Hiroaki Sawai1

1Graduate School of Engineering, Gunma University, 1-5-1 Tenjin-cho, Kiryu, Gunma 376-8515, Japan, 2Graduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka 565-0871, Japan and 3PRESTO, JST (Japan Science and Technology Agency)

*Corresponding Author E-mail: kuwahara{at}chem-bio.gunma-u.ac.jp

Abstract

We have attempted to synthesise a complimentary strand using oligo-DNA with modified bases, sugars and phosphates as a template strand by polymerase reaction. Analogues bearing C5-substituted uracil, those with amide linkage [–CH2C=ONH–] in place of phospho-diester linkage and those bearing 2'-O, 4'-C-bridged sugar were used. Primer extension reactions were carried out to synthesise complimentary DNA strands. The reactions depended on the thermostable DNA polymerase used, the type of modification or the number of the modified position on the template strand.


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