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Nucleic Acids Symposium Series 2005 49(1):61-62; doi:10.1093/nass/49.1.61
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© 2005 Oxford University Press

Kinetics and thermodynamics of G-quadruplexes

Julien Gros1, Mateus Webba da Silva2, Anne De Cian1, Samir Amrane1, Frédéric Rosu3, Anne Bourdoncle1, Barbara Saccà1, Patrizia Alberti1, Laurent Lacroix1 and Jean-Louis Mergny1 *

1 Laboratoire de Biophysique, INSERM U565, CNRS UMR5153, Muséum National d'Histoire Naturelle, 43 rue Cuvier, 75005 Paris (France), 2 Department of Medicine, Duke University Medical Center, Durham, North Carolina (USA), 3 Laboratoire de Chimie Physique Biologique, Université de Liège, (Belgium)

The melting of tetramolecular DNA or RNA quadruplexes is kinetically irreversible. However, rather than being a hindrance, this kinetic inertia allows us to study association and dissociation processes independently. General rules have been extended to longer DNA motifs or sequences containing modified bases such as 8-oxo or 7-deaza guanine. Results were compared with the canonical TG4T and TG5T tetramers: we demonstrate huge differences (up to 105-fold) in the association constants of these quadruplexes depending on primary sequence.



* mergny{at}vnumail.com


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