Nucleic Acids Symp Ser -- Table of Contents (November 2004, 48)

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Contents: No. 48, November 2004 [Index by Author]
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Articles

Thirty-first Symposium on Nucleic Acids Chemistry

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Articles

Hiroki Kumamoto, Kazuki Deguchi, Nonoko Takahashi, and Hiromichi Tanaka: Synthesis of novel 4'-modified neplanocin A analogues based on radical-mediated sulfur-extrusive stannylation
Nucleic Acids Symp Ser 2004 48: 1-2; doi:10.1093/nass/48.1.1 [Abstract] [PDF] [Request Permissions]

Tokumi Maruyama, Shigetada Kozai, Yosuke Demizu, Myriam Witvrouw, Christophe Pannecouque, Jan Balzarini, Robert Snoeck, Graciella Andrei, and Erik De Clercq: Synthesis and antiviral activity of 1-substituted 3-(3,5-dimethylbenzyl)uracil against HIV-1
Nucleic Acids Symp Ser 2004 48: 3-4; doi:10.1093/nass/48.1.3 [Abstract] [PDF] [Request Permissions]

Toshiyuki Kaneko, Toshinori Katsurabara, Yasuhiro Matsui, Mariko Aso, Noboru Koga, and Hiroshi Suemune: Molecular design of novel spin-labeled nucleosides directly attached base moiety
Nucleic Acids Symp Ser 2004 48: 5-6; doi:10.1093/nass/48.1.5 [Abstract] [PDF] [Request Permissions]

Mitsuaki Sekiguchi, Satoshi Obika, Roonjang Somjing, and Takeshi Imanishi: Synthesis and properties of a novel bridged nucleic acid analogue bearing a P3' $->$ N5' phosphoroamidate linkage, 5'-amino-3', 5'-BNA
Nucleic Acids Symp Ser 2004 48: 7-8; doi:10.1093/nass/48.1.7 [Abstract] [PDF] [Request Permissions]

Tadashi Umemoto and Takeshi Wada: Oligoribonucleotide synthesis by the use of 1-(2-cyanoethoxy)ethyl (CEE) as a 2'-hydroxy protecting group
Nucleic Acids Symp Ser 2004 48: 9-10; doi:10.1093/nass/48.1.9 [Abstract] [PDF] [Request Permissions]

Victor E. Marquez: Chemical and biological consequences of locking the conformation of nucleosides at the two antipodal extremes of the pseudorotational cycle
Nucleic Acids Symp Ser 2004 48: 11-12; doi:10.1093/nass/48.1.11 [Abstract] [PDF] [Request Permissions]

Hisao Saneyoshi, Keigo Tamaki, Kohji Seio, and Mitsuo Sekine: Synthesis and properties of 2'-O-cyanoethylated RNA derivatives
Nucleic Acids Symp Ser 2004 48: 13-14; doi:10.1093/nass/48.1.13 [Abstract] [PDF] [Request Permissions]

Kenichi Miyata, Ryouta Mineo, Ryuji Tamamushi, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine: Synthesis and properties of 5-pyrrolyl-cytidine and uridine derivatives
Nucleic Acids Symp Ser 2004 48: 15-16; doi:10.1093/nass/48.1.15 [Abstract] [PDF] [Request Permissions]

Yoshihito Ueno, Takumi Kato, Kumiko Sato, Yasutomo Ito, Masahiro Ebihara, Jin Jiye, and Yukio Kitade: Synthesis and properties of DNA analogs consisting of the benzene-phosphate backbone
Nucleic Acids Symp Ser 2004 48: 17-18; doi:10.1093/nass/48.1.17 [Abstract] [PDF] [Request Permissions]

Takayoshi Watanabe, Toshikazu Bando, Yan Xu, and Hiroshi Sugiyama: Efficient generation of 2'-deoxyuridin-5-yl at 5'-(G/C)AA^XU^XU-3' (X = Br, I) sequences in duplex DNA under UV-irradiation
Nucleic Acids Symp Ser 2004 48: 19-20; doi:10.1093/nass/48.1.19 [Abstract] [PDF] [Request Permissions]

Yasuo Komatsu, Naoshi Kojima, Ken Nonaka, Yumi Fujinawa, Maiko Sugino, Akiko Mikami, Jyunya Hashida, Eiko Ohtsuka, and Kenichi Matsubara: Synthesis and application of new amino modification analogues for functional oligonucleotide
Nucleic Acids Symp Ser 2004 48: 21-22; doi:10.1093/nass/48.1.21 [Abstract] [PDF] [Request Permissions]

Fumi Nagatsugi, Shizuka Nakayama, Monsur Md. Ali, and Shigeki Sasaki: Selective nitrosyl group transfer reaction to cytidine using oligonucleotides bearing S-nitrosothioguanosine
Nucleic Acids Symp Ser 2004 48: 23-24; doi:10.1093/nass/48.1.23 [Abstract] [PDF] [Request Permissions]

Masaki Tsukamoto, Erkki J. Nurminen, Toshihiro Iwase, Masanori Kataoka, and Yoshihiro Hayakawa: Internucleotide-linkage formation via the phosphoramidite method using a carboxylic acid as a promoter
Nucleic Acids Symp Ser 2004 48: 25-26; doi:10.1093/nass/48.1.25 [Abstract] [PDF] [Request Permissions]

Takehiko Wada, Yusuke Hashimoto, Hirofumi Sato, and Yoshihisa Inoue: Synthesis of peptide ribonucleic acid consisting of D- and L- ${gamma}$ -glutamic acid as a backbone structure
Nucleic Acids Symp Ser 2004 48: 27-28; doi:10.1093/nass/48.1.27 [Abstract] [PDF] [Request Permissions]

Akira Ono: Development of novel oligonucleotide-based sensors which are highly Hg(II) selective and are insensitive to other heavy metal ions
Nucleic Acids Symp Ser 2004 48: 29-30; doi:10.1093/nass/48.1.29 [Abstract] [PDF] [Request Permissions]

Kazuki Tainaka, Akimitsu Okamoto, and Isao Saito: Development of a novel solvatochromic pyrimidine analog for probing local dielectric environment of DNA polymerase
Nucleic Acids Symp Ser 2004 48: 31-32; doi:10.1093/nass/48.1.31 [Abstract] [PDF] [Request Permissions]

Masaki Hagihara, Tetsuya Hasegawa, Yukiko Tanabe, Shin-ichi Sato, Susumu Yoshikawa, Katsutoshi Ohkubo, and Takashi Morii: Design of sensing ribonucleopeptides for small ligands
Nucleic Acids Symp Ser 2004 48: 33-34; doi:10.1093/nass/48.1.33 [Abstract] [PDF] [Request Permissions]

Rie Kawai, Michiko Kimoto, Tsuneo Mitsui, Shigeyuki Yokoyama, and Ichiro Hirao: Site-specific fluorescent labeling of RNA by a base-pair expanded transcription system
Nucleic Acids Symp Ser 2004 48: 35-36; doi:10.1093/nass/48.1.35 [Abstract] [PDF] [Request Permissions]

Kouichi Ishiyama, Gerald E. Smyth, Toshihiro Ueda, Yutaka Masutomi, Tadaaki Ohgi, and Junichi Yano: Novel nucleic acids with left-handed helicity
Nucleic Acids Symp Ser 2004 48: 37-38; doi:10.1093/nass/48.1.37 [Abstract] [PDF] [Request Permissions]

Toru Sugiyama, Reiko Kuroda, and Atsushi Kittaka: Topological stabilization of PNA-DNA invasion complex
Nucleic Acids Symp Ser 2004 48: 39-40; doi:10.1093/nass/48.1.39 [Abstract] [PDF] [Request Permissions]

Hiroki Kumamoto, Keisuke Kato, Kazuhiro Haraguchi, Hiromichi Tanaka, Takao Nitanda, Masanori Baba, Ginger E. Dutschman, and Yung-Chi Cheng: Synthesis of carbocyclic analogues of 4'-ethynyl- and 4'-cyano-d4T
Nucleic Acids Symp Ser 2004 48: 41-42; doi:10.1093/nass/48.1.41 [Abstract] [PDF] [Request Permissions]

Kazuhiro Haraguchi, Masanori Sumino, Shingo Takeda, and Hiromichi Tanaka: An alternative method suitable for a large scale synthesis of 4'-ethynyl-2',3'-didehydro-3'-deoxythymidine
Nucleic Acids Symp Ser 2004 48: 43-44; doi:10.1093/nass/48.1.43 [Abstract] [PDF] [Request Permissions]

Kohei Yamada, Noritake Matsumoto, and Hiroyuki Hayakawa: Practical synthesis of 2'-deoxy-2'-fluoroarabinofuranosyl purine nucleosides by chemo-emzymatic method
Nucleic Acids Symp Ser 2004 48: 45-46; doi:10.1093/nass/48.1.45 [Abstract] [PDF] [Request Permissions]

Yutaka Kubota, Kazuhiro Haraguchi, Mayumi Kunikata, Mari Hayashi, Masaomi Ohkawa, and Hiromichi Tanaka: Stereoselective synthesis of 4'-carbon-substituted xylofuranosyladenines
Nucleic Acids Symp Ser 2004 48: 47-48; doi:10.1093/nass/48.1.47 [Abstract] [PDF] [Request Permissions]

Hideki Takasu, Yoshie Tsuji, Hironao Sajiki, and Kosaku Hirota: Modification of the sugar moiety in uridine via 2',3'-epoxyuridine derivatives
Nucleic Acids Symp Ser 2004 48: 49-50; doi:10.1093/nass/48.1.49 [Abstract] [PDF] [Request Permissions]

Risa Watanabe and Hideyuki Sugimura: Examination of protecting groups in the synthesis of nucleosides by intramolecular glycosylation
Nucleic Acids Symp Ser 2004 48: 51-52; doi:10.1093/nass/48.1.51 [Abstract] [PDF] [Request Permissions]

Kazuo Kamaike, Yoshihiro Kayama, Mitsuhisa Isobe, and Etsuko Kawashima: Efficient syntheses of [2-¹⁵N]guanosine and 2'-deoxy[2-¹⁵N]guanosine derivatives
Nucleic Acids Symp Ser 2004 48: 53-54; doi:10.1093/nass/48.1.53 [Abstract] [PDF] [Request Permissions]

Yusuke Ohba, Yusuke Terui, Kazuo Kamaike, Tairo Oshima, and Etsuko Kawashima: Design, synthesis and analysis of a pyrrolepolyamide-nucleoside hybrid
Nucleic Acids Symp Ser 2004 48: 55-56; doi:10.1093/nass/48.1.55 [Abstract] [PDF] [Request Permissions]

Takeshi Wada, Satoshi Fujiwara, Terutoshi Sato, Natsuhisa Oka, and Kazuhiko Saigo: Stereocontrolled synthesis of phosphorothioate RNA by the oxazaphospholidine approach
Nucleic Acids Symp Ser 2004 48: 57-58; doi:10.1093/nass/48.1.57 [Abstract] [PDF] [Request Permissions]

Mariko Aso, Mitsuhiro Fukuda, Kazuteru Usui, and Hiroshi Suemune: Synthesis of oligonucleotide containing 4'-o-nitrobenzyloxythymidine and its reactivity
Nucleic Acids Symp Ser 2004 48: 59-60; doi:10.1093/nass/48.1.59 [Abstract] [PDF] [Request Permissions]

Ali Md. Monsur, Fumi Nagatsugi, Motoi Oishi, Yukio Nagasaki, Kazunari Kataoka, and Shigeki Sasaki: Synthesis and evaluation of the functional oligonucleotides-PEG conjugates
Nucleic Acids Symp Ser 2004 48: 61-62; doi:10.1093/nass/48.1.61 [Abstract] [PDF] [Request Permissions]

Hiroyasu Inohara, Satoshi Obika, and Takeshi Imanishi: 2',4'-BNA derivatives bearing an unnatural nucleobase: Synthesis and application to triplex-forming oligonucleotides
Nucleic Acids Symp Ser 2004 48: 63-64; doi:10.1093/nass/48.1.63 [Abstract] [PDF] [Request Permissions]

Kohji Seio, Takeshi Sasami, and Mitsuo Sekine: Synthesis and base recognition ability of oligoribonucleotides incorporating 2'-O-methyl-3-deazaguanosine
Nucleic Acids Symp Ser 2004 48: 65-66; doi:10.1093/nass/48.1.65 [Abstract] [PDF] [Request Permissions]

Satoshi Shuto, Yutaka Tamura, Yuji Yamamoto, Tetsuya Kodama, Shuichi Hoshika, Satoshi Ichikawa, Yoshihito Ueno, Eiko Ohtsuka, Yasuo Komatsu, and Akira Matsuda: Stable hairpins having a loop consisting of 3'-deoxy-4'-C-(2-hydroxyethyl)thymidines
Nucleic Acids Symp Ser 2004 48: 67-68; doi:10.1093/nass/48.1.67 [Abstract] [PDF] [Request Permissions]

Yosuke Taniguchi, Ayako Nakamura, Yusuke Senko, and Shigeki Sasaki: Effects of 5-substituted pyrimidine nucleoside bases of WNA on stability of triplex DNA
Nucleic Acids Symp Ser 2004 48: 69-70; doi:10.1093/nass/48.1.69 [Abstract] [PDF] [Request Permissions]

Akimitsu Okamoto, Taku Kamei, Kazuo Tanaka, and Isao Saito: Electrochemical behavior of gold electrodes modified with photosensitizer-tethered DNA
Nucleic Acids Symp Ser 2004 48: 70-71; doi:10.1093/nass/48.1.70 [Abstract] [PDF] [Request Permissions]

Yuji Ochi, Akimitsu Okamoto, and Isao Saito: Fluorescent probe for the detection of DNA conformational transition
Nucleic Acids Symp Ser 2004 48: 73-74; doi:10.1093/nass/48.1.73 [Abstract] [PDF] [Request Permissions]

Reiko Iwase, Yuji Namie, Tetsuji Yamaoka, and Akira Murakami: Synthesis and properties of fluorescent-labeled oligonucleotides containing amide-linked dinucleoside with pyrene
Nucleic Acids Symp Ser 2004 48: 75-76; doi:10.1093/nass/48.1.75 [Abstract] [PDF] [Request Permissions]

Masayuki Ogino, Yoshinaga Yoshimura, Akio Nakazawa, Isao Saito, and Kenzo Fujimoto: Reversible DNA photoligation via ${alpha}$ -5-cyanovinyldeoxyuridine
Nucleic Acids Symp Ser 2004 48: 77-78; doi:10.1093/nass/48.1.77 [Abstract] [PDF] [Request Permissions]

Yukihiro Tachi, Arimichi Okazaki, Kazuhito Tanabe, Hiroshi Hatta, and Sei-ichi Nishimoto: Drug release from functionalized oligodeoxynucleotide by photo-induced electron transfer
Nucleic Acids Symp Ser 2004 48: 79-80; doi:10.1093/nass/48.1.79 [Abstract] [PDF] [Request Permissions]

Yoshinaga Yoshimura, Yoshiaki Ito, and Kenzo Fujimoto: Interstrand DNA photocrosslinking by photoresponsive artificial nucleic acid
Nucleic Acids Symp Ser 2004 48: 81-82; doi:10.1093/nass/48.1.81 [Abstract] [PDF] [Request Permissions]

Satoshi Ikeya and Akira Ono: Formation of novel double-stranded structures formed by oligodeoxyribonucleotides carrying aromatic groups
Nucleic Acids Symp Ser 2004 48: 83-84; doi:10.1093/nass/48.1.83 [Abstract] [PDF] [Request Permissions]

Yuko Watanabe, Takahiro Minowa, and Akira Ono: Metal ion binding of substituted pyrimidine base pairs in DNA duplexes
Nucleic Acids Symp Ser 2004 48: 85-86; doi:10.1093/nass/48.1.85 [Abstract] [PDF] [Request Permissions]

Yan Xu, Hiroshi Sugiyama, Kazuhiko Tanaka, and Hideji Osuga: The recognition of Z-DNA by chiral helicene
Nucleic Acids Symp Ser 2004 48: 87-88; doi:10.1093/nass/48.1.87 [Abstract] [PDF] [Request Permissions]

Ryu Tashiro and Hiroshi Sugiyama: The molecular-thermometer based on B-Z transition of DNA
Nucleic Acids Symp Ser 2004 48: 89-90; doi:10.1093/nass/48.1.89 [Abstract] [PDF] [Request Permissions]

Akimitsu Okamoto, Ken-ichiro Nishiza, and Isao Saito: Synthesis and fluorescence properties of oligonucleotides containing pyrene-dimethylaniline chromophore
Nucleic Acids Symp Ser 2004 48: 91-92; doi:10.1093/nass/48.1.91 [Abstract] [PDF] [Request Permissions]

Chikara Dohno and Isao Saito: Base-discriminating fluorescent DNA probe based on the guanine-specific fluorescence quenching
Nucleic Acids Symp Ser 2004 48: 93-94; doi:10.1093/nass/48.1.93 [Abstract] [PDF] [Request Permissions]

Naoto Maru, Ken-ichiroh Shohda, and Tadashi Sugawara: Assembling liposomes by means of an oligonucleotide tagged with a lipophilic unit
Nucleic Acids Symp Ser 2004 48: 95-96; doi:10.1093/nass/48.1.95 [Abstract] [PDF] [Request Permissions]

Isamu Fujiya and Kazuo Harada: Formation of dendrimeric RNA assemblies though RNA loop-loop interactions
Nucleic Acids Symp Ser 2004 48: 97-98; doi:10.1093/nass/48.1.97 [Abstract] [PDF] [Request Permissions]

Takanori Kubo, Ken-ichi Kanno, Bakalova Rumiana, Hideki Ohba, and Masayuki Fujii: Precisely controlled intracellular delivery of DNA-peptide conjugates
Nucleic Acids Symp Ser 2004 48: 99-100; doi:10.1093/nass/48.1.99 [Abstract] [PDF] [Request Permissions]

Hidetaka Torigoe, Akira Ono, and Ayako Takamori: Silver (I) cation specifically stabilizes heteroduplex with C:C mismatch base pair: toward the efficient detection of single nucleotide polymorphism (2)
Nucleic Acids Symp Ser 2004 48: 101-102; doi:10.1093/nass/48.1.101 [Abstract] [PDF] [Request Permissions]

Shinobu Sato, Takahiko Nojima, Hiroki Kondo, and Shigeori Takenaka: Electrochemical gene detection by using adamanthyl naphthalene diimide coupled with ferrocenyl-ß-cyclodextrin
Nucleic Acids Symp Ser 2004 48: 103-104; doi:10.1093/nass/48.1.103 [Abstract] [PDF] [Request Permissions]

Itsuko Ishizaki, Makoto Nomura, Kazuo Yamamoto, Toshifumi Matsuyama, Masaki Mishima, and Chojiro Kojima: Solution NMR study of DNA recognition mechanism of IRF4 protein
Nucleic Acids Symp Ser 2004 48: 105-106; doi:10.1093/nass/48.1.105 [Abstract] [PDF] [Request Permissions]

Hisae Karimata, Shu-ichi Nakano, Tatsuo Ohmichi, Junji Kawakami, and Naoki Sugimoto: Stabilization of a DNA duplex under molecular crowding conditions of PEG
Nucleic Acids Symp Ser 2004 48: 107-108; doi:10.1093/nass/48.1.107 [Abstract] [PDF] [Request Permissions]

Toshimasa Kirihata, Shu-ichi Nakano, and Naoki Sugimoto: Secondary structure change of oligonucleotide induced by salts
Nucleic Acids Symp Ser 2004 48: 109-110; doi:10.1093/nass/48.1.109 [Abstract] [PDF] [Request Permissions]

Akimasa Matsugami, Yusuke Tamura, Michiko Kudo, Seiichi Uesugi, Rika Yamamoto, Penmetcha Kumar, and Masato Katahira: Structure of RNA aptamer for HIV Tat complexed with Tat-derived peptide
Nucleic Acids Symp Ser 2004 48: 111-112; doi:10.1093/nass/48.1.111 [Abstract] [PDF] [Request Permissions]

Hiroshi Yamaguchi, Shuji Oda, Yoshinori Kondo, Akira Ono, and Yoshiyuki Tanaka: Spectroscopic analysis of DNA duplexes includingT-T mismatches
Nucleic Acids Symp Ser 2004 48: 113-114; doi:10.1093/nass/48.1.113 [Abstract] [PDF] [Request Permissions]

Chieko Naoe, Masaru Tsunoda, and Kazuo T. Nakamura: Structural study of the archaeal homologous recombinant protein complexed with DNA fragments
Nucleic Acids Symp Ser 2004 48: 115-116; doi:10.1093/nass/48.1.115 [Abstract] [PDF] [Request Permissions]

Yoshiteru Sato, Kousei Kimura, and Akio Takénaka: Crystallization and preliminary X-ray analysis of RNA oligomers containing CUG repeats which induce type 1 myotonic dystrophy
Nucleic Acids Symp Ser 2004 48: 117-118; doi:10.1093/nass/48.1.117 [Abstract] [PDF] [Request Permissions]

Satoru Shimizu, Tomonori Kobuna, Tomoko Sunami, and Akio Takénaka: Crystal structure of d(CGAAGC); association of two parallel-stranded duplexes through anti-parallel-stranded duplex formation
Nucleic Acids Symp Ser 2004 48: 119-120; doi:10.1093/nass/48.1.119 [Abstract] [PDF] [Request Permissions]

Kenta Mitomi, Tanashaya Ciengshin, Jiro Kondo, and Akio Takénaka: Structural stability and length of I-motif of G-quartet in DNA octaplex
Nucleic Acids Symp Ser 2004 48: 121-122; doi:10.1093/nass/48.1.121 [Abstract] [PDF] [Request Permissions]

Yuki Goto, Akio Kobori, Hitoshi Suda, and Kazuhiko Nakatani: Separation of mismatched DNA by using the affinity column immobilizing mismatch-binding ligands
Nucleic Acids Symp Ser 2004 48: 123-124; doi:10.1093/nass/48.1.123 [Abstract] [PDF] [Request Permissions]

Toshihiro Ihara, Motoko Mukae, Tomohiro Fujii, Yusuke Kitamura, and Akinori Jyo: Cooperative hybridization of DNA conjugates and its analytical application
Nucleic Acids Symp Ser 2004 48: 125-126; doi:10.1093/nass/48.1.125 [Abstract] [PDF] [Request Permissions]

Satoshi Fujii: Database and structural characterization of intermolecularinteractions in nucleic acid and protein complex
Nucleic Acids Symp Ser 2004 48: 127-128; doi:10.1093/nass/48.1.127 [Abstract] [PDF] [Request Permissions]

Akio Kobori, Tao Peng, Gosuke Hayashi, and Kazuhiko Nakatani: SPR fingerprinting of mismatched base pair
Nucleic Acids Symp Ser 2004 48: 129-130; doi:10.1093/nass/48.1.129 [Abstract] [PDF] [Request Permissions]

Toshiyuki Takiya, Yasuhiro Seto, Hideyo Yasuda, Tohru Suzuki, and Keiichi Kawai: An empirical approach for thermal stability (Tm) prediction of PNA/DNA duplexes
Nucleic Acids Symp Ser 2004 48: 131-132; doi:10.1093/nass/48.1.131 [Abstract] [PDF] [Request Permissions]

Shun-ichi Kawahara, Yasuomi Takagi, Kazunari Taira, and Hideyuki Kobayashi: Theoretical study about remarkable stability of guanine tetramer
Nucleic Acids Symp Ser 2004 48: 133-134; doi:10.1093/nass/48.1.133 [Abstract] [PDF] [Request Permissions]

Akifumi Nishihira, Hiroaki Ozaki, Masayuki Wakabayashi, Masayasu Kuwahara, and Hiroaki Sawai: Detection of biomolecule by aptamer beacon
Nucleic Acids Symp Ser 2004 48: 135-136; doi:10.1093/nass/48.1.135 [Abstract] [PDF] [Request Permissions]

Takako Ohyama, Hajime Mita, and Yasuhiko Yamamoto: Study on the complexation between DNA and cationic porphyrin derivatives
Nucleic Acids Symp Ser 2004 48: 137-138; doi:10.1093/nass/48.1.137 [Abstract] [PDF] [Request Permissions]

Takuma Katayama, Atsushi Maruyama, Satoshi Obika, Takeshi Imanishi, and Hidetaka Torigoe: Synergistic stabilization of triplex by combination of comb-type cationic copolymer and 2',4'-BNA
Nucleic Acids Symp Ser 2004 48: 139-140; doi:10.1093/nass/48.1.139 [Abstract] [PDF] [Request Permissions]

Yuhsuke Ohmi, Masahiro Sato, and Masato Ohtsuka: Direct subcloning of target region from BAC insert using restriction enzymes that produce non-identical cohesive ends
Nucleic Acids Symp Ser 2004 48: 141-142; doi:10.1093/nass/48.1.141 [Abstract] [PDF] [Request Permissions]

Masato Abe, Hiroyuki Hori, Takeshi Nakanishi, Fumio Arisaka, Tomio Ogasawara, Tatsuya Sawasaki, Masaya Kitamura, and Yaeta Endo: Application of cell-free translation systems to studies of cofactor binding proteins
Nucleic Acids Symp Ser 2004 48: 143-144; doi:10.1093/nass/48.1.143 [PDF] [Request Permissions]

Hiroaki Terato, Ruri Tanaka, Yusuke Nakaarai, Yoshiya Furusawa, and Hiroshi Ide: Analysis of DNA damage generated by high-energy particles
Nucleic Acids Symp Ser 2004 48: 145-146; doi:10.1093/nass/48.1.145 [Abstract] [PDF] [Request Permissions]

Masahiro Sato, Masato Ohtsuka, and Yuhsuke Ohmi: Repeated GenomiPhi, phi29 DNA polymerase-based rolling circle amplification, is useful for generation of large amounts of plasmid DNA
Nucleic Acids Symp Ser 2004 48: 147-148; doi:10.1093/nass/48.1.147 [Abstract] [PDF] [Request Permissions]

Yoji Yamamoto and Makoto Komiyama: Combination of S1 nuclease and PNA for site-selective hydrolysis of double-stranded DNA. -Comparison with the site-selective hydrolysis using Ce(IV)/EDTAY-
Nucleic Acids Symp Ser 2004 48: 149-150; doi:10.1093/nass/48.1.149 [Abstract] [PDF] [Request Permissions]

Yoshihito Kitamura, Junya Yoshida, Wen Chen, Jing-Min Zhou, Jun Sumaoka, and Makoto Komiyama: Manipulation of DNA through Ce(IV)/EDTA-induced site-selective hydrolysis using phosphate-bearing oligonucleotides
Nucleic Acids Symp Ser 2004 48: 151-152; doi:10.1093/nass/48.1.151 [Abstract] [PDF] [Request Permissions]

Mikio Kato, Shingo Hokabe, Takeshi Haku, Shinsei Minoshima, Kuniaki Nagayama, and Nobuyoshi Shimizu: Single-stranded DNA structure of a minisatellite sequence isolated from Acanthopagrus latus
Nucleic Acids Symp Ser 2004 48: 153-154; doi:10.1093/nass/48.1.153 [PDF] [Request Permissions]

Masaru Tsunoda, Yoshio Kusakabe, Nobutada Tanaka, Satoshi Ohno, Masashi Nakamura, Toshiya Senda, Mitsuo Sekine, Takashi Yokogawa, Kazuya Nishikawa, and Kazuo T. Nakamura: Three-dimensional structure of the ternary complex of yeast tyrosyl-tRNA synthetase
Nucleic Acids Symp Ser 2004 48: 155-156; doi:10.1093/nass/48.1.155 [Abstract] [PDF] [Request Permissions]

Yasumitsu Sakamoto, Nobutada Tanaka, Tomomi Ichimiya, Tadashi Kurihara, and Kazuo T. Nakamura: Three-dimensional structure of a cyclic-nucleotide phosphodiesterasefrom human brain
Nucleic Acids Symp Ser 2004 48: 157-158; doi:10.1093/nass/48.1.157 [Abstract] [PDF] [Request Permissions]

Masato Odawara: Molecular scanning of susceptibility genes for the development of coronary heart disease in Japanese
Nucleic Acids Symp Ser 2004 48: 159-160; doi:10.1093/nass/48.1.159 [Abstract] [PDF] [Request Permissions]

Takayuki Ichikawa, Atsushi Kuno, Masumi Taki, Takahiro Hohsaka, Masahiko Sisido, Satoshi Kaneko, Kazunari Taira, Hideyuki Kobayashi, and Tsunemi Hasegawa: Site-directed incorporation of non-natural amino acid into Streptomyces xylanase
Nucleic Acids Symp Ser 2004 48: 161-162; doi:10.1093/nass/48.1.161 [Abstract] [PDF] [Request Permissions]

Yuko Nishiyama, Yohei Okuda, Hye-Sook Kim, Takahisa Huruta, Mikio Kimura, and Yusuke Wataya: Genetic analysis of mefloquine-resistant mechanism of Plasmodium falciparum
Nucleic Acids Symp Ser 2004 48: 163-164; doi:10.1093/nass/48.1.163 [Abstract] [PDF] [Request Permissions]

Tomoaki Ando, Hiromichi Suzuki, Kimihito Komura, Terumichi Tanaka, Akira Hiraishi, and Yo Kikuchi: Extracellular RNAs produced by a marine photosynthetic bacterium Rhodovulum sulfidophilum
Nucleic Acids Symp Ser 2004 48: 165-166; doi:10.1093/nass/48.1.165 [Abstract] [PDF] [Request Permissions]

Zenjiro Sampei, Yuri Nagao, Tetsuya Fukazawa, Satoko Fukagawa, Takatoshi Matsuo, Kimiko Endo, Rie Yatsunami, and Satoshi Nakamura: Gene cloning and deletion analysis of chitinase J from alkaliphilic Bacillus sp. strain J813
Nucleic Acids Symp Ser 2004 48: 167-168; doi:10.1093/nass/48.1.167 [Abstract] [PDF] [Request Permissions]

Takayuki Kosaka, Takatoshi Ozawa, Rie Yatsunami, and Satoshi Nakamura: Molecular cloning of transducer genes hjtA and hjtC from extremely halophilic archaeon Haloarcula japonica
Nucleic Acids Symp Ser 2004 48: 169-170; doi:10.1093/nass/48.1.169 [Abstract] [PDF] [Request Permissions]

Katuhito Kino, Nobutoshi lto, Kaoru Sugasawa, Hiroshi Sugiyama, and Fumio Hanaoka: Translesion synthesis by human DNA polymerase ${eta}$ across oxidative products of guanine
Nucleic Acids Symp Ser 2004 48: 171-172; doi:10.1093/nass/48.1.171 [Abstract] [PDF] [Request Permissions]

Naoki Makita, Satoru Inoue, Toshihiro Akaike, and Atsushi Maruyama: Improved performance of a DNA nanomachine by cationic copolymers
Nucleic Acids Symp Ser 2004 48: 173-174; doi:10.1093/nass/48.1.173 [Abstract] [PDF] [Request Permissions]

Atsushi Katafuchi, Mayumi Matsubara, Hiroaki Terato, Shigenori Iwai, Fumio Hanaoka, and Hiroshi Ide: Damage specificity of human DNA glycosylases for oxidative pyrimidine lesions
Nucleic Acids Symp Ser 2004 48: 175-176; doi:10.1093/nass/48.1.175 [Abstract] [PDF] [Request Permissions]

Kazuo Yoshida: A simple relationship between occurrence of base sequence patterns and GC contents in DNA and its computer simulation
Nucleic Acids Symp Ser 2004 48: 177-178; doi:10.1093/nass/48.1.177 [Abstract] [PDF] [Request Permissions]

Takayuki Sekito, Kozi Okamoto, Hiromichi Kitano, and Kazuo Yoshida: Up-to-dating of complete sequenced DNA data of Hansenula wingei yeast mitochondria
Nucleic Acids Symp Ser 2004 48: 179-180; doi:10.1093/nass/48.1.179 [Abstract] [PDF] [Request Permissions]

Yoshinori Tsuchiya, Kazuki Morioka, Jyunsuke Shirai, and Kazuo Yoshida: Structural requirements of signal peptide in insect cell
Nucleic Acids Symp Ser 2004 48: 181-182; doi:10.1093/nass/48.1.181 [Abstract] [PDF] [Request Permissions]

Binzhi Ren and Makoto Komiyama: High-throughput SNP genotyping by combining exonuclease III, nuclease S1, and acridine-bearing PNA
Nucleic Acids Symp Ser 2004 48: 183-184; doi:10.1093/nass/48.1.183 [Abstract] [PDF] [Request Permissions]

Wataru Tsuchiya, Takuya Umehara, Atsushi Kuno, and Tsunemi Hasegawa: Determination of tryptophan tRNA recognition sites for tryptophanyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1
Nucleic Acids Symp Ser 2004 48: 185-186; doi:10.1093/nass/48.1.185 [Abstract] [PDF] [Request Permissions]

Toyofumi Yamaguchi, Hazuki Takahashi, Yoko Harada, Masato Yoshikawa, Saori Iyono, Motoko Inomata, Tokumi Maruyama, and Mineo Saneyoshi: Telomere shortening in human HL60 cells by treatment with deoxyguanosine analogs
Nucleic Acids Symp Ser 2004 48: 187-188; doi:10.1093/nass/48.1.187 [Abstract] [PDF] [Request Permissions]

Jianzhi Pan, Chuyuan Jin, Takehide Murata, and Kazunari K. Yokoyama: Histone modification activities of JDP2 associated with retinoic acid-induced differentiation of F9 cells
Nucleic Acids Symp Ser 2004 48: 189-190; doi:10.1093/nass/48.1.189 [Abstract] [PDF] [Request Permissions]

Toshiyasu Mikuma, Hiroaki Kawasaki, Yasuhiko Yamamoto, and Kazunari Taira: Overexpression of Dicer enhances RNAi-mediated gene silencing by short-hairpin RNAs (shRNAs) in human cells
Nucleic Acids Symp Ser 2004 48: 191-192; doi:10.1093/nass/48.1.191 [Abstract] [PDF] [Request Permissions]

Rie Yatsunami, Shinichi Takaichi, and Satoshi Nakamura: Isolation of crtI homolog from extremely halophilic archaeon Haloarcula japonica strain TR-1
Nucleic Acids Symp Ser 2004 48: 193-194; doi:10.1093/nass/48.1.193 [Abstract] [PDF] [Request Permissions]

Takuya Umehara, Kotaro Fukuda, Fumiko Nishikawa, Satoru Sekiya, Michinori Kohara, Tsunemi Hasegawa, and Satoshi Nishikawa: Designing and analysis of a potent bi-functional aptamers that inhibit protease and helicase activities of HCV NS3
Nucleic Acids Symp Ser 2004 48: 195-196; doi:10.1093/nass/48.1.195 [Abstract] [PDF] [Request Permissions]

Seiya Watanabe, Tsutomu Kodaki, and Keisuke Makino: Various mutations by using yeast gene for protein-engineering
Nucleic Acids Symp Ser 2004 48: 197-198; doi:10.1093/nass/48.1.197 [Abstract] [PDF] [Request Permissions]

Jing Zhao, Jingmin Zhou, Mingzhe Liu, Hiroyuki Asanuma, and Makoto Komiyama: Photoregulation of in vitro transcription/translation of GFP by tethering an azobenzene to T7 promoter
Nucleic Acids Symp Ser 2004 48: 199-200; doi:10.1093/nass/48.1.199 [Abstract] [PDF] [Request Permissions]

Terumichi Tanaka, Shinnosuke Haga, Naomi Kanda, Tomoaki Ando, and Yo Kikuchi: Mutational analyses of neighboring domains of active center of RNase P ribozyme
Nucleic Acids Symp Ser 2004 48: 201-202; doi:10.1093/nass/48.1.201 [Abstract] [PDF] [Request Permissions]

Junji Kawakami, Chisako Maiya, and Naoki Sugimoto: Analysis of the secondary structure of a ribozyme that requires His as a cofactor
Nucleic Acids Symp Ser 2004 48: 203-204; doi:10.1093/nass/48.1.203 [Abstract] [PDF] [Request Permissions]

Shunta Sasaki, Akihiko Narita, Toshikazu Bando, and Hiroshi Sugiyama: Molecular design of alkylating pyrrole-imidazole polyamides with indole linker
Nucleic Acids Symp Ser 2004 48: 205-206; doi:10.1093/nass/48.1.205 [Abstract] [PDF] [Request Permissions]

ATM Zafrul Azam, Minoru Hasegawa, Tomohisa Moriguchi, and Kazuo Shinozuka: Synthesis and alternate-stranded triplex forming ability of novel ${alpha}$ -ß chimeric oligonucleotides bearing an intercalator-conjugated nucleobase
Nucleic Acids Symp Ser 2004 48: 207-208; doi:10.1093/nass/48.1.207 [Abstract] [PDF] [Request Permissions]

Wataru Yoshioka, Yoshiya Ikawa, Luc Jaeger, and Tan Inoue: A ligase ribozyme obtained from a structured pool
Nucleic Acids Symp Ser 2004 48: 209-210; doi:10.1093/nass/48.1.209 [Abstract] [PDF] [Request Permissions]

Hiroaki Kawasaki and Kazunari Taira: MicroRNA-196 inhibits HOXB8 expression in myeloid differentiation of HL60 cells
Nucleic Acids Symp Ser 2004 48: 211-212; doi:10.1093/nass/48.1.211 [Abstract] [PDF] [Request Permissions]

Hitomi Kimura, Hiroaki Kawasaki, and Kazunari Taira: Mouse microRNA-23b regulates expression of Hes1 gene in P19 cells
Nucleic Acids Symp Ser 2004 48: 213-214; doi:10.1093/nass/48.1.213 [Abstract] [PDF] [Request Permissions]

Mayumi Amano: NMR studies of the alternative conformation of hammerhead ribozyme in the solution
Nucleic Acids Symp Ser 2004 48: 215-216; doi:10.1093/nass/48.1.215 [Abstract] [PDF] [Request Permissions]

Kazuhiro Hara, Masaya Kitamura, and Hideo Inoue: Synthesis and hybridization studies on oligonucleotide-metal complex conjugates
Nucleic Acids Symp Ser 2004 48: 217-218; doi:10.1093/nass/48.1.217 [Abstract] [PDF] [Request Permissions]

Yun Shi, Kenzo Machida, Akinori Kuzuya, and Makoto Komiyama: Simultaneous use of highly acidic acridine and rigid chiral linker for efficient site-selective RNA scission
Nucleic Acids Symp Ser 2004 48: 219-220; doi:10.1093/nass/48.1.219 [Abstract] [PDF] [Request Permissions]

Mingzhe Liu, Hiroyuki Asanuma, and Makoto Komiyama: Real time monitoring of the interaction of T7 RNA polymerase with azobenzene-tethered T7 promoter by biosensor
Nucleic Acids Symp Ser 2004 48: 221-222; doi:10.1093/nass/48.1.221 [Abstract] [PDF]

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