Nucleic Acids Symp Ser -- Table of Contents (September 2005, 49)

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Contents: No. 49, September 2005 [Index by Author]
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Articles

4th International Symposium on Nucleic Acids Chemistry (32nd Symposium on Nucleic Acids Chemistry in Japan)

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Articles

Mikimasa Tanada and Shigeki Sasaki: Discrimination of the length of two remote binding sites by the spacer-linked DNA minor groove binders
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 1-2; doi:10.1093/nass/49.1.1 [Abstract] [PDF] [Request Permissions]

Mariko Aso, Toshiyuki Kaneko, John Walter Mirc, Noboru Koga, and Hiroshi Suemune: Properties and EPR studies of oligodeoxynucleotides containing 2-N-tert-butylaminoxylpurines
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 3-4; doi:10.1093/nass/49.1.3 [Abstract] [PDF] [Request Permissions]

S. M. Abdur Rahman, Sayori Seki, Kazushige Utsuki, Satoshi Obika, Kazuyuki Miyashita, and Takeshi Imanishi: Synthesis and properties of 2',4'-BNA^NC, a second generation BNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 5-6; doi:10.1093/nass/49.1.5 [Abstract] [PDF] [Request Permissions]

Tomohisa Moriguchi, ATM Zafrul Azam, and Kazuo Shinozuka: Synthesis and alternate-stranded triple helix forming ability of novel anthraquinone modified alpha-beta chimeric DNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 7-8; doi:10.1093/nass/49.1.7 [Abstract] [PDF] [Request Permissions]

Takehiko Wada, Mayuko Kikkawa, Hirofumi Sato, and Yoshihisa Inoue: DNA Recognition and Recognition Control of ${alpha}$ -Peptide Ribonucleic Acids by External Factors
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 9-10; doi:10.1093/nass/49.1.9 [Abstract] [PDF] [Request Permissions]

Shan-Ho Chou: Stable and Unique DNA Duplex Motifs
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 11-12; doi:10.1093/nass/49.1.11 [Abstract] [PDF] [Request Permissions]

Byeang Hyean Kim: Chemical modification from nucleosides to nucleic acid systems
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 13-14; doi:10.1093/nass/49.1.13 [PDF] [Request Permissions]

John A. Secrist, III: Nucleosides as anticancer agents: from concept to the clinic
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 15-16; doi:10.1093/nass/49.1.15 [Abstract] [PDF] [Request Permissions]

Kazunori Kataoka, Keiji Itaka, Nobuhiro Nishiyama, Yuichi Yamasaki, Motoi Oishi, and Yukio Nagasaki: Smart polymeric micelles as nanocarriers for oligonucleotides and siRNA delivery
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 17-18; doi:10.1093/nass/49.1.17 [Abstract] [PDF] [Request Permissions]

Akihiro Ohkubo, Rintarou Kasuya, Kazushi Sakamoto, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine: SNPs analysis by use of protected oligonucleotide probes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 19-20; doi:10.1093/nass/49.1.19 [Abstract] [PDF] [Request Permissions]

Kohji Seio, Takeshi Sasami, Akihiro Ohkubo, and Mitsuo Sekine: Synthesis and hybridization properties of 2'-O-methyl-RNA incorporating 3-deazaguanine derivatives
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 21-22; doi:10.1093/nass/49.1.21 [Abstract] [PDF] [Request Permissions]

Takayuki Shibata and David M. Williams: Novel post DNA synthesis chemistry for preparing oligonucleotides containing O6-modified purines
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 23-24; doi:10.1093/nass/49.1.23 [Abstract] [PDF] [Request Permissions]

Takashi Kudoh, Takashi Murayama, Akira Matsuda, and Satoshi Shuto: Synthesis and biological activity of 4'',6''-unsaturated cyclic ADP-carbocyclic-ribose
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 25-26; doi:10.1093/nass/49.1.25 [Abstract] [PDF] [Request Permissions]

Toshihide Kawanaka, Mamoru Shimizu, Kazuhiko Saigo, and Takeshi Wada: A novel method for the synthesis of DNA and its analogs by the use of BH₃ as a protecting group for phosphonic acid
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 27-28; doi:10.1093/nass/49.1.27 [Abstract] [PDF] [Request Permissions]

Michal Hocek: Novel modified purine bases and nucleosides: new methodologies of synthesis and biological activity
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 29-30; doi:10.1093/nass/49.1.29 [Abstract] [PDF] [Request Permissions]

Lak Shin Jeong, Hyuk Woo Lee, Kenneth A. Jacobson, Sang Kook Lee, and Moon Woo Chun: Development of potent and selective human A₃ adenosine receptor agonists
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 31-32; doi:10.1093/nass/49.1.31 [Abstract] [PDF] [Request Permissions]

Ichiro Hirao, Tsuneo Mitsui, Michiko Kimoto, Rie Kawai, Akira Sato, and Shigeyuki Yokoyama: Non-hydrogen-bonded base pairs for specific transcription
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 33-34; doi:10.1093/nass/49.1.33 [Abstract] [PDF] [Request Permissions]

Hiroyuki Asanuma, Daijiro Matsunaga, and Makoto Komiyama: Clear-cut photo-regulation of the formation and dissociation of the DNA duplex by modified oligonucleotide involving multiple azobenzenes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 35-36; doi:10.1093/nass/49.1.35 [Abstract] [PDF] [Request Permissions]

Hiroshi Abe and Eric T Kool: Universal linkers for signal amplification in auto-ligating probes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 37-38; doi:10.1093/nass/49.1.37 [Abstract] [PDF] [Request Permissions]

Tao Peng and Kazuhiko Nakatani: Molecular labeling of the CGG trinucleotide repeat
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 39-40; doi:10.1093/nass/49.1.39 [Abstract] [PDF] [Request Permissions]

Toshihiro Ihara, Motoko Mukae, Miyuki Tabara, Yusuke Kitamura, and Akinori Jyo: Photochemical ligation between anthracene-DNA conjugates and its analytical application to gene analysis
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 41-42; doi:10.1093/nass/49.1.41 [Abstract] [PDF] [Request Permissions]

Daisuke Miyoshi, Zhong-Ming Wang, Hisae Karimata, and Naoki Sugimoto: DNA nanowire sensitive to the surrounding condition
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 43-44; doi:10.1093/nass/49.1.43 [Abstract] [PDF] [Request Permissions]

Akimitsu Okamoto and Kazuki Tainaka: Sequence-selective 5-methylcytosine oxidation for epigenotyping
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 45-46; doi:10.1093/nass/49.1.45 [Abstract] [PDF] [Request Permissions]

Makoto Koizumi, Koji Morita, Miho Takagi, Hiroaki Yasumo, and Atsushi Kasuya: SNP genotyping by allele-specific PCR using ENA® primers
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 47-48; doi:10.1093/nass/49.1.47 [Abstract] [PDF] [Request Permissions]

Kazuhiko Nakatani, Shinya Hagihara, Yuki Goto, Akio Kobori, Masaki Hagihara, Gosuke Hayashi, Motoki Kyo, Makoto Nomura, Masaki Mishima, and Chojiro Kojima: Solution structure of a small-molecular ligand complexed with CAG trinucleotide repeat DNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 49-50; doi:10.1093/nass/49.1.49 [Abstract] [PDF] [Request Permissions]

Yoshiyuki Tanaka, Hiroshi Yamaguchi, Shuji Oda, Chojiro Kojima, Akira Ono, Kazunari Taira, and Yoshinori Kondo: NMR spectroscopic analyses of functional nucleic acids-metal interaction and their solution structure analyses
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 51-52; doi:10.1093/nass/49.1.51 [Abstract] [PDF] [Request Permissions]

Naoki Makita, Arihiro Kano, Asako Yamayoshi, Toshihiro Akaike, and Atsushi Maruyama: Modulation of highly ordered structures of human telomeric sequence by cationic copolymers
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 53-54; doi:10.1093/nass/49.1.53 [Abstract] [PDF] [Request Permissions]

Yutu Shen, John D. Brennan, and Yingfu Li: Characterization of a fluorescence-signaling and RNA-cleaving deoxyribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 55-56; doi:10.1093/nass/49.1.55 [Abstract] [PDF] [Request Permissions]

Marc M. Greenberg: DNA interstrand cross-links from modified nucleotides: mechanism and application
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 57-58; doi:10.1093/nass/49.1.57 [Abstract] [PDF] [Request Permissions]

Eric Westhof: Molecular recognition between the ribosomal decoding site and natural or non-natural aminoglycosides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 59-60; doi:10.1093/nass/49.1.59 [Abstract] [PDF] [Request Permissions]

Julien Gros, Mateus Webba da Silva, Anne De Cian, Samir Amrane, Frédéric Rosu, Anne Bourdoncle, Barbara Saccà, Patrizia Alberti, Laurent Lacroix, and Jean-Louis Mergny: Kinetics and thermodynamics of G-quadruplexes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 61-62; doi:10.1093/nass/49.1.61 [Abstract] [PDF] [Request Permissions]

Ayako Furukawa and Hidetaka Torigoe: Tetraplex structure of fission yeast telomeric DNA and its unfolding by the interaction with telomeric DNA binding protein Pot1
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 63-64; doi:10.1093/nass/49.1.63 [Abstract] [PDF] [Request Permissions]

Ella Czarina Magat Juan, Jiro Kondo, Takanori Ito, Yoshihito Ueno, Akira Matsuda, and Akio Takénaka: X-Ray analyses of hybrid duplexes between antisense oligonucleotides containing 5-(N-aminohexyl)carbamoyl-2'-O-methyluridine and their target RNAs
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 65-66; doi:10.1093/nass/49.1.65 [Abstract] [PDF] [Request Permissions]

Hirofumi Ohishi, Koji Tukamoto, Mamiko Odoko, Kazimierz Grzeskowiak, Naoyoshi Maezaki, Nobuo Okabe, Tetsuaki Tanaka, and Toshimasa Ishida: The development of crystallization and X-ray crystallography method of long stem DNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 67-68; doi:10.1093/nass/49.1.67 [Abstract] [PDF] [Request Permissions]

Akimasa Matsugami, Hidehito Tochio, Emi Niyada, Yusuke Tamura, Michiko Kudo, Tomoko S. Misono, Penmetcha Kumar, and Masato Katahira: Structure of RNA aptamer complexed with an RNA-binding peptide of Tat with aid of residue-specific ¹³C, ¹⁵N labeling
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 69-70; doi:10.1093/nass/49.1.69 [Abstract] [PDF] [Request Permissions]

Kenta Mitomi, Jiro Kondo, Wataru Adachi, Shun-ichi Umeda, Kazuhiro Fujita, Tomoko Sunami, and Akio Takénaka: Octaplex formation of d(GCGAAAGC) with the double A-quartet
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 71-72; doi:10.1093/nass/49.1.71 [Abstract] [PDF] [Request Permissions]

Yoji Yamamoto, Jing-Min Zhou, Takafumi Tomita, Akihiko Uehara, Yuichiro Aiba, Akira Watanabe, Hiroyuki Aburatani, and Makoto Komiyama: Gene manipulation using artificial restriction DNA cutter
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 73-74; doi:10.1093/nass/49.1.73 [Abstract] [PDF] [Request Permissions]

Ken-ichi Shinohara, Shunta Sasaki, Toshikazu Bando, and Hiroshi Sugiyama: Sequence-specific gene silencing by alkylating Py-Im polyamide
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 75-76; doi:10.1093/nass/49.1.75 [Abstract] [PDF] [Request Permissions]

Shuichi Hoshika, Noriaki Minakawa, and Akira Matsuda: RNA interference induced by siRNAs modified with 4'-thioribonucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 77-78; doi:10.1093/nass/49.1.77 [Abstract] [PDF] [Request Permissions]

Tetsuya Hasegawa, Susumu Yoshikawa, and Takashi Morii: Ribonucleopeptides recognize the phosphotyrosine residue
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 79-80; doi:10.1093/nass/49.1.79 [Abstract] [PDF] [Request Permissions]

Masayasu Kuwahara, Kazuomi Ohsawa, Toshiyuki Kasamatsu, Atsushi Shoji, Hiroaki Sawai, and Hiroaki Ozaki: Screening of a glutamic acid-binding aptamer from arginine-modified DNA library
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 81-82; doi:10.1093/nass/49.1.81 [Abstract] [PDF] [Request Permissions]

Kazunori Ikebukuro, Wataru Yoshida, and Koji Sode: Development of a novel sensing probe using DNA aptamer inhibiting enzymatic activity
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 83-84; doi:10.1093/nass/49.1.83 [Abstract] [PDF] [Request Permissions]

Subash C.B. Gopinath, Kazunori Kawasaki, and Penmetcha K.R. Kumar: Selection of RNA-aptamer against human influenza B virus
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 85-86; doi:10.1093/nass/49.1.85 [Abstract] [PDF] [Request Permissions]

Tomoko Kuwabara, Jenny Hsieh, Kinichi Nakashima, Masaki Warashina, Kazunari Taira, and Fred H. Gage: The NRSE smRNA specifies the fate of adult hippocampal neural stem cells
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 87-88; doi:10.1093/nass/49.1.87 [Abstract] [PDF] [Request Permissions]

Floyd E. Romesberg: Efforts to expand the genetic code
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 89-90; doi:10.1093/nass/49.1.89 [Abstract] [PDF] [Request Permissions]

Makoto Miyagishi, Sahohime Matsumoto, Hideo Akashi, Hiroaki Kawasaki, Taro Fukao, Yoko Fukuda, Masayuki Sano, Yoshio Kato, Yasuomi Takagi, Yoshiyuki Tanaka, Masaki Warashina, Tomoko Kuwabara, Shinya Y. Sawata, Yutaka Ikeda, Shun-ichi Kawahara, Kaul C. Sunil, Renu Wadhwa, and Kazunari Taira: Chemistry-based RNA technologies: demonstration of usefulness of libraries of ribozymes and short hairpin RNAs (shRNAs)
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 91-92; doi:10.1093/nass/49.1.91 [Abstract] [PDF] [Request Permissions]

Hiroyuki Tsuchiya, Tomoko Sawamura, Masayuki Uchiyama, Hideyoshi Harashima, and Hiroyuki Kamiya: Conversion of nucleotide sequence with single-stranded DNA fragment prepared from phagemid DNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 93-94; doi:10.1093/nass/49.1.93 [Abstract] [PDF] [Request Permissions]

Seung Pil Pack, Mitsuru Nonogawa, Nagendra Kumar Kamisetty, Tsutomu Kodaki, and Keisuke Makino: Biophysical and biochemical properties of oxanine-containing oligodeoxynucleotide
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 95-96; doi:10.1093/nass/49.1.95 [Abstract] [PDF] [Request Permissions]

Tetsuya Suzuki, Toshiyuki Okada, Chie Otsuka, Kei Moriyama, David Loakes, and Kazuo Negishi: Mutagenic properties of ribonucleotide analogues in reverse transcription with HIV and AMV reverse transcriptases
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 97-98; doi:10.1093/nass/49.1.97 [Abstract] [PDF] [Request Permissions]

Takaichi Hamano, Kazuhiro Matsuo, Yurina Hibi, Naoko Takahashi, Yoshio Mabuchi, Tsuyoshi Soji, Shinji Irie, Hideki Yanai, Takashi Hara, Shudo Yamazaki, Naoki Yamamoto, Hiroshi Takaku, and Takashi Okamoto: Replication-defective HIV isolated from seronegative individuals at high risk for HIV infection
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 99-100; doi:10.1093/nass/49.1.99 [Abstract] [PDF] [Request Permissions]

Kazuma Takada, Chie Takemoto, Masahito Kawazoe, Takayuki Konno, Noriko Matsuta, Daisuke Kurita, Krisana Asano, Mikako Shirouzu, Shigeyuki Yokoyama, Akira Muto, and Hyouta Himeno: Functional analysis of factors involved in trans-translation
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 101-102; doi:10.1093/nass/49.1.101 [Abstract] [PDF] [Request Permissions]

Shigeo Yoshinari, Shinji Fujita, Ryoji Masui, Seiki Kuramitsu, Shin-ichi Yokobori, Kiyoshi Kita, and Yoh-ichi Watanabe: Functional reconstitution of an archaeal splicing endonuclease in vitro
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 103-104; doi:10.1093/nass/49.1.103 [Abstract] [PDF] [Request Permissions]

Ae Yil Kim, Hea Ok Kim, Myoung Jung Kim, Moon Woo Chun, Kang Man Lee, Kenneth A. Jacobson, and Lak Shin Jeong: Synthesis of 3'-ureidoadenosines and their high binding affinity at the mutant A₃ adenosine receptor
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 105-106; doi:10.1093/nass/49.1.105 [Abstract] [PDF] [Request Permissions]

Long Xuan Zhao, Mikyung Yun, Hea Ok Kim, Jeong A Lee, Won Jun Choi, Kang Man Lee, Sang Kook Lee, Young B. Lee, Chang Ho Ahn, and Lak Shin Jeong: Design, synthesis, and anticancer activity of fluorocyclopentenyl-pyrimidines
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 107-108; doi:10.1093/nass/49.1.107 [Abstract] [PDF] [Request Permissions]

Tokumi Maruyama, Nobuyasu Moriwaka, Yosuke Demizu, and Masami Ohtsuka: Synthesis of purin-2-yl carboxylate from O6-methylguanosine
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 109-110; doi:10.1093/nass/49.1.109 [Abstract] [PDF] [Request Permissions]

Yutaka Kubota, Mayumi Kunikata, Rumi Ohsawa, Yuria Odajima, Kazuhiro Haraguchi, and Hiromichi Tanaka: Synthesis of 4'-substituted cordycepins
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 111-112; doi:10.1093/nass/49.1.111 [Abstract] [PDF] [Request Permissions]

Haruhiko Taguchi, Takeshi Narita, Kohji Seio, and Mitsuo Sekine: Synthesis of 2'- or 3'-O-heteroaryl substituted nucleic acid derivatives and their biological properties
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 113-114; doi:10.1093/nass/49.1.113 [Abstract] [PDF] [Request Permissions]

Hidehito Urata, Mami Fujimori, Chie Aono, Emi Hrada, Tomoko Matsumoto, Tomomi Yamakawa, and Masao Akagi: Characterization of Na⁺-montmorillonite-catalyzed reaction of racemic ribonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 115-116; doi:10.1093/nass/49.1.115 [Abstract] [PDF] [Request Permissions]

Mamoru Hyodo, Yumi Sato, Yoshihiro Hayakawa, and David K. R. Karaolis: Chemical behavior of bis(3'–5')diguanylic acid in aqueous solutions
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 117-118; doi:10.1093/nass/49.1.117 [Abstract] [PDF] [Request Permissions]

Masanori Kataoka, Taisuke Hirano, Kenji Kuroda, and Yoshihiro Hayakawa: Pyrimido[4,5-d]pyrimidine-2,4,5,7-(1H, 3H, 6H, 8H)-tetraone as a novel universal base
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 119-120; doi:10.1093/nass/49.1.119 [Abstract] [PDF] [Request Permissions]

Masanori Kataoka, Taisuke Hirano, Kenji Kuroda, and Yoshihiro Hayakawa: Synthesis of a peptide nucleic acid oligomer with pyrimido[4,5-d]pyrimidine-2,4,5,7-(1H,3H,6H,8H)-tetraone as a nucleobase
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 121-122; doi:10.1093/nass/49.1.121 [Abstract] [PDF] [Request Permissions]

Itaru Okamoto, Kohji Seio, and Mitsuo Sekine: SNPs analysis by use of oligonucleotides containing 2'-O-methyl-2-thiouridines
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 123-124; doi:10.1093/nass/49.1.123 [Abstract] [PDF] [Request Permissions]

Hisao Saneyoshi, Khoji Seio, and Mitsuo Sekine: A new method for RNA synthesis by use of the cyanoethyl group as the 2'-hydroxyl protecting group
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 125-126; doi:10.1093/nass/49.1.125 [Abstract] [PDF] [Request Permissions]

Akihiro Ohkubo, Katsufumi Aoki, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine: Development of new N-unprotected phosphoramidite building blocks having a silyl-type linker
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 127-128; doi:10.1093/nass/49.1.127 [Abstract] [PDF] [Request Permissions]

Yukiko Kato, Kazuhiko Saigo, and Takeshi Wada: A novel method for the synthesis of DNA using 2'-deoxyribonucleoside 5'-phosphites as monomer units
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 129-130; doi:10.1093/nass/49.1.129 [Abstract] [PDF] [Request Permissions]

Natsuhisa Oka, Yukihiro Maizuru, Mamoru Shimizu, Kazuhiko Saigo, and Takeshi Wada: Stereocontrolled synthesis of dinucleoside boranophosphates by an oxazaphospholidine method
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 131-132; doi:10.1093/nass/49.1.131 [Abstract] [PDF] [Request Permissions]

Timofei S. Zatsepin, Dmitry A. Stetsenko, Michael J. Gait, and Tatiana S. Oretskaya: 2'-Hydrazine oligonucleotides: synthesis and efficient conjugation with aldehydes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 133-134; doi:10.1093/nass/49.1.133 [Abstract] [PDF] [Request Permissions]

Young Jun Seo, Gil Tae Hwang, and Byeang Hyean Kim: Pyrene-labeled deoxyuridine and deoxyadenosine: fluorescent discriminating phenomena in their duplex and hairpin oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 135-136; doi:10.1093/nass/49.1.135 [Abstract] [PDF] [Request Permissions]

Yoshikazu Ohshita, Mitsunobu Nakamura, Atsushi Maruyama, and Kazushige Yamana: New pyrene-excimer probe for detection of single base mismatches in DNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 137-138; doi:10.1093/nass/49.1.137 [Abstract] [PDF] [Request Permissions]

Narihisa Orino, Satoshi Kumamoto, Mitsunobu Nakamura, and Kazushige Yamana: Electrochemical detection of single base mismatches in DNA using redox-modified oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 139-140; doi:10.1093/nass/49.1.139 [Abstract] [PDF] [Request Permissions]

Yukinori Ohtoshi, Mitsunobu Nakamura, and Kazushige Yamana: Alignment of pyrene aromatics along RNA double helix
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 141-142; doi:10.1093/nass/49.1.141 [Abstract] [PDF] [Request Permissions]

Yoshinaga Yoshimura, Yuuki Noguchi, Hideaki Sato, and Kenzo Fujimoto: RNA template-directed photoligation via 5-carboxyvinyl-2'-deoxyuridine
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 143-144; doi:10.1093/nass/49.1.143 [Abstract] [PDF] [Request Permissions]

Shinzi Ogasawara and Kenzo Fujimoto: Photo-triggered ODN manipulation on DNA chip
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 145-146; doi:10.1093/nass/49.1.145 [Abstract] [PDF] [Request Permissions]

Ken-ichi Haruna, Kazuhito Tanabe, Haruka Iida, and Sei-ichi Nishimoto: Switching of charge transport in DNA by regulated triplex formations at the dual sites
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 147-148; doi:10.1093/nass/49.1.147 [Abstract] [PDF] [Request Permissions]

Hisatsugu Yamada, Kazuhito Tanabe, and Sei-ichi Nishimoto: Detection of 5-methylcytosine in DNA by photo-functionalized oligodeoxynucleotides possessing 2-methyl-1,4-naphthoquinone chromophore
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 149-150; doi:10.1093/nass/49.1.149 [Abstract] [PDF] [Request Permissions]

Reiko Iwase, Udai Fukui, Akio Kobori, Tetsuji Yamaoka, and Akira Murakami: Synthesis of antisense oligonucleotides containing a photocleavable protecting group on a guanine base and their photoinduced duplex formation
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 151-152; doi:10.1093/nass/49.1.151 [Abstract] [PDF] [Request Permissions]

Yoshio Saito, Kazuo Hanawa, Keigo Hayashi, Kaori Motegi, Akimitsu Okaoto, and Isao Saito: Synthesis and properties of novel base-discriminating fluorescent (BDF) nucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 153-154; doi:10.1093/nass/49.1.153 [Abstract] [PDF] [Request Permissions]

Kazuki Tainaka, Yoshimasa Fujiwara, and Akimitsu Okamoto: Nile Red nucleoside : Novel nucleoside analog with a fluorophore replacing the DNA base
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 155-156; doi:10.1093/nass/49.1.155 [Abstract] [PDF] [Request Permissions]

Masaharu Tomizu, Osamu Nakagawa, Satoshi Obika, and Takeshi Imanishi: Promotion of acid-mediated cleavage of oligonucleotide P3' $->$ N5' phosphoroamidates by triplex formation : A novel approach to sequence-specific DNA detection
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 157-158; doi:10.1093/nass/49.1.157 [Abstract] [PDF] [Request Permissions]

Sachiko Matsugu, Hiroyasu Inohara, Satoshi Obika, and Takeshi Imanishi: Synthesis and triplex-forming properties of 2',4'-BNA derivatives bearing pyridines as an unnatural nucleobase
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 159-160; doi:10.1093/nass/49.1.159 [Abstract] [PDF] [Request Permissions]

Takahiro Minowa, Tomohiko Nishiuchi, Yuko Watanabe, and Akira Ono: Synthesis of metal ion-mediated double helical structures of modified oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 161-162; doi:10.1093/nass/49.1.161 [Abstract] [PDF] [Request Permissions]

Akira Ono, Yuriko Hirai, Momo Kosuge, and Mio Kubota: Synthesis and properties of the aromatic clusters arrayed along DNA strands
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 163-164; doi:10.1093/nass/49.1.163 [Abstract] [PDF] [Request Permissions]

Yuriko Hirai and Akira Ono: Preparation of modified oligonucleotides by the post-synthetic modification on resin method
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 165-166; doi:10.1093/nass/49.1.165 [Abstract] [PDF] [Request Permissions]

Toru Sugiyama, Yasutada Imamura, Wataru Hakamata, Masaaki Kurihara, and Atsushi Kittaka: Cooperative strand invasion of double-stranded DNA by peptide nucleic acid
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 167-168; doi:10.1093/nass/49.1.167 [Abstract] [PDF] [Request Permissions]

Takashi Iguchi, Hirohumi Ishikawa, Hiroharu Matumoto, Mamoru Mizuno, Kohtaro Goto, and Keita Hamasaki: Amino disaccharides having an ${alpha}$ -(1 $->$ 4) or a ß-(1 $->$ 4) linkage, their synthesis and evaluation as a potential inhibitor for HIV-1 TAR-Tat
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 169-170; doi:10.1093/nass/49.1.169 [Abstract] [PDF] [Request Permissions]

Makiko Horie, Koji Morita, Junko Kawakami, Shinya Tsutsumi, Osamu Ando, and Makoto Koizumi: Synthesis and properties of ENA® oligonucleotides targeted to human telomerase RNA subunit
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 171-172; doi:10.1093/nass/49.1.171 [Abstract] [PDF] [Request Permissions]

Yosuke Taniguchi, Ayako Nakamura, Eriko Aoki, and Shigeki Sasaki: Modification of the aromatic ring of the WNA analogues for expansion of the triplex recognition codes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 173-174; doi:10.1093/nass/49.1.173 [Abstract] [PDF] [Request Permissions]

Fumi Nagatsugi, Sayaka Mori, Md. Monsur Ali, Yuki Ogata, and Shigeki Sasaki: Substituent effects on the in situ activation of the double activated cross-linking reaction
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 175-176; doi:10.1093/nass/49.1.175 [Abstract] [PDF] [Request Permissions]

Yan Xu and Hiroshi Sugiyama: Structural and functional characterizations of the G-quartet and i-motif elements in retinoblastoma susceptibility genes (Rb)
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 177-178; doi:10.1093/nass/49.1.177 [Abstract] [PDF] [Request Permissions]

Waka Hasiba, Yan Xu, and Hiroshi Sugiyama: Reactivity of 2'-deoxyuridin-1'-yl radical in various DNA structures
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 179-180; doi:10.1093/nass/49.1.179 [Abstract] [PDF] [Request Permissions]

Naoshi Kojima, Maiko Sugino, Akiko Mikami, Ken Nonaka, Yumi Fujinawa, Yoji Ueda, Kousuke Sato, Eiko Ohtsuka, Kenichi Matsubara, and Yasuo Komatsu: High throughput purification of amino-modified oligonucleotides and its application to novel detection system of gene expression
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 181-182; doi:10.1093/nass/49.1.181 [Abstract] [PDF] [Request Permissions]

Aya Shibata, Yoshihito Ueno, Masayuki Nakanishi, Akira Matsuda, and Yukio Kitade: Synthesis of cross-linked triple helical DNAs possessing high affinity to triple helical DNA binding protein
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 183-184; doi:10.1093/nass/49.1.183 [Abstract] [PDF] [Request Permissions]

Chikara Dohno, Akimitsu Okamoto, and Isao Saito: Schiff base-mediated base pairing
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 185-186; doi:10.1093/nass/49.1.185 [Abstract] [PDF] [Request Permissions]

Mayumi Takahashi, Naonori Inoue, Noriaki Minakawa, and Akira Matsuda: Synthesis and properties of 2'-O-methyl-4'-thioRNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 187-188; doi:10.1093/nass/49.1.187 [Abstract] [PDF] [Request Permissions]

Masanori Nakane, Satoshi Ichikawa, and Akira Matsuda: Synthesis of cross-linked circular DNAs using Hüisgen reaction
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 189-190; doi:10.1093/nass/49.1.189 [Abstract] [PDF] [Request Permissions]

Kazuteru Usui, Mitsuhiro Fukuda, Mariko Aso, and Hiroshi Suemune: Amine modification reaction of C4'-oxidized abasic site generated from its caged precursors
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 191-192; doi:10.1093/nass/49.1.191 [Abstract] [PDF] [Request Permissions]

Rei Ohmori, Seiko Hakozaki, and Kazuo Harada: Regulation of the structure of RNA assemblies through RNA tertiary interactions
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 193-194; doi:10.1093/nass/49.1.193 [Abstract] [PDF] [Request Permissions]

Yusuke Doi, Kenichi Hitomi, John A. Tainer, and Shigenori Iwai: Synthesis of oligonucleotides containing 2'-fluorinated thymidine glycol as mechanism-based inhibitors of endonuclease III
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 195-196; doi:10.1093/nass/49.1.195 [Abstract] [PDF] [Request Permissions]

Nahoko Morii, Giyuu Kido, Takeo Konakahara, and Hisayuki Morii: Judgment for DNA-binding modes of dye molecules by novel chain-aligned film method
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 197-198; doi:10.1093/nass/49.1.197 [Abstract] [PDF] [Request Permissions]

Hiroshi Yamaguchi, Shuji Oda, Chojiro Kojima, Akira Ono, Yoshinori Kondo, and Yoshiyuki Tanaka: Spectroscopic analyses of DNA duplexes in the presence of mercury ions
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 199-200; doi:10.1093/nass/49.1.199 [Abstract] [PDF] [Request Permissions]

Akimitsu Okamoto, Kazuki Tainaka, Yuji Ochi, and Isao Saito: SNPs typing by base-discriminating fluorescence DNA probe
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 201-202; doi:10.1093/nass/49.1.201 [Abstract] [PDF] [Request Permissions]

Takashi Sakamoto, Atsushi Mahara, Kobori Akio, Tetsuji Yamaoka, and Akira Murakami: Luminescence anisotropy-based detection of nucleic acids and proteins using long-lifetime Ru(II) complex as a luminescent label
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 203-204; doi:10.1093/nass/49.1.203 [Abstract] [PDF] [Request Permissions]

Takehiro Seino, Seiichi Nishizawa, and Norio Teramae: Hydrogen bond-mediated binding of ligands to a nucleobase at a gap site in a DNA duplex and its use for fluorescence detection of single-nucleotide polymorphisms
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 205-206; doi:10.1093/nass/49.1.205 [Abstract] [PDF] [Request Permissions]

Kohki Okabe, Hisafumi Ikeda, Yoshie Harada, and Takashi Funatsu: Development of real time imaging of specific messenger RNA in a living cell using artificial antisense nucleic acids
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 207-208; doi:10.1093/nass/49.1.207 [Abstract] [PDF] [Request Permissions]

Yo Ishihama, Hisashi Tadakuma, Tokio Tani, and Takashi Funatsu: Single molecule imaging of mRNA splicing
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 209-210; doi:10.1093/nass/49.1.209 [Abstract] [PDF] [Request Permissions]

Shiho Fujii, Satoshi Obika, and Takeshi Imanishi: Effects of the 2',4'-BNA modification on the sequence specificity of molecular beacons
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 211-212; doi:10.1093/nass/49.1.211 [Abstract] [PDF] [Request Permissions]

Makoto Nomura, Shinya Hagihara, Yuki Goto, Kazuhiko Nakatani, and Chojiro Kojima: NMR structural analysis of the G.G mismatch DNA complexed with naphthyridine-dimer
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 213-214; doi:10.1093/nass/49.1.213 [Abstract] [PDF] [Request Permissions]

Hajime Sugiyama, Nobue Adachi, Susumu Kawauchi, Tetsuo Kozasa, Takuma Katayama, Hidetaka Torigoe, Akira Ono, and Yutaka Tamura: Computational evaluation of the specific interaction between cation and mismatch base pair
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 215-216; doi:10.1093/nass/49.1.215 [Abstract] [PDF] [Request Permissions]

Hidetaka Torigoe, Tetsuo Kozasa, Ayako Takamori, and Akira Ono: Thermodynamic analyses of the specific interaction between C:C mismatch base pair and silver (I) cation: Toward the efficient detection of single nucleotide polymorphism
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 217-218; doi:10.1093/nass/49.1.217 [Abstract] [PDF] [Request Permissions]

Qiang Gao, Hiroyuki Satake, Qing Dai, Katsuya Ono, Seiichi Nishizawa, and Norio Teramae: Strong binding of naphthyridine derivatives to a guanine base in DNA duplexes containing an AP site
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 219-220; doi:10.1093/nass/49.1.219 [Abstract] [PDF] [Request Permissions]

Chunxia Zhao, Qing Dai, Takehiro Seino, Ying-Yu Cui, Seiichi Nishizawa, and Norio Teramae: Fluorescence detection of thymidine-related single-nucleotide polymorphisms by 3, 5-diaminopyrazine derivatives
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 221-222; doi:10.1093/nass/49.1.221 [Abstract] [PDF] [Request Permissions]

Kazuya Hirata, Daisuke Ishii, Arihiro Kano, Asako Yamayoshi, Toshihiro Akaike, and Atsushi Maruyama: Discrimination of single nucleotide polymorphisms by strand exchange assay using partially double-stranded probes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 223-224; doi:10.1093/nass/49.1.223 [Abstract] [PDF] [Request Permissions]

Nagendra Kumar Kamisetty, Seung Pil Pack, Mitsuru Nonogawa, Tsutomu Kodaki, and Keisuke Makino: Fabrication of efficient DNA microarray by additional surface modification and functional probe design
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 225-226; doi:10.1093/nass/49.1.225 [Abstract] [PDF] [Request Permissions]

Akimitsu Okamoto, Taku Kamei, and Isao Saito: Genotyping with hole-transporting DNA self-assembled monolayer
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 227-228; doi:10.1093/nass/49.1.227 [Abstract] [PDF] [Request Permissions]

Toshihiro Ihara, Yusuke Kitamura, Kenji Okada, Masato Tazaki, and Akinori Jyo: Asymmetric cooperativity in tandem hybridization of the DNA conjugates bearing chiral metal complexes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 229-230; doi:10.1093/nass/49.1.229 [Abstract] [PDF] [Request Permissions]

Kosuke Mukumoto, Takahiko Nojima, and Shigeori Takenaka: Investigation of ferrocenyl carbodiimide (FCDI) in the modification reaction of nucleic acids
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 231-232; doi:10.1093/nass/49.1.231 [Abstract] [PDF] [Request Permissions]

Satoru Nagatoishi, Takahiko Nojima, and Shigeori Takenaka: Complexation of thrombin-binding aptamer oligonucleotide carrying fluorescence resonance energy transfer (FRET) dyes at both termini with potassium ion
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 233-234; doi:10.1093/nass/49.1.233 [Abstract] [PDF] [Request Permissions]

Anne De Cian, Lionel Guittat, Kazuo Shin-ya, Jean-François Riou, and Jean-Louis Mergny: Affinity and selectivity of G4 ligands measured by FRET
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 235-236; doi:10.1093/nass/49.1.235 [Abstract] [PDF] [Request Permissions]

Shinobu Sato, Hiroki Kondo, Takahiko Nojima, and Shigeori Takenaka: Electrochemical detection of telomeric quadruplex DNA using ferrocenyl naphthalene diimide
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 237-238; doi:10.1093/nass/49.1.237 [Abstract] [PDF] [Request Permissions]

Hisae Karimata, Daisuke Miyoshi, and Naoki Sugimoto: Structure and stability of DNA quadruplexes under molecular crowding conditions
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 239-240; doi:10.1093/nass/49.1.239 [Abstract] [PDF] [Request Permissions]

Toshimasa Kirihata, Shu-ichi Nakano, Satoshi Fujii, Manabu Matsumoto, Masayasu Kuwahara, Hiroaki Sawai, and Naoki Sugimoto: Coformational Switch of Oligonucleotide Induced by Spermine
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 241-242; doi:10.1093/nass/49.1.241 [Abstract] [PDF] [Request Permissions]

Mamiko Inoue, Daisuke Miyoshi, and Naoki Sugimoto: Structural switch of telomere DNA by pH and monovalent cation
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 243-244; doi:10.1093/nass/49.1.243 [Abstract] [PDF] [Request Permissions]

Takako Ohyama, Yoshitake Kato, Hajime Mita, Shigenori Nagatomo, and Yasuhiko Yamamoto: Structural and functional characterization of novel G-quadruplexed DNA-heme coordination complex
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 245-246; doi:10.1093/nass/49.1.245 [Abstract] [PDF] [Request Permissions]

Yoshitake Kato, Takako Ohyama, Shigenori Nagatomo, Hajime Mita, and Yasuhiko Yamamoto: Dynamics and thermodynamics of dimerization of parallel G-quadruplexed DNA through ${pi}$ - ${pi}$ stacking interaction
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 247-248; doi:10.1093/nass/49.1.247 [Abstract] [PDF] [Request Permissions]

Kazimierz Grzeskowiak, Hirofumi Ohishi, and Vasilli Ivanov: Circular dichroism spectra of d(CGCGCGCGCGCG): evidence for intermediate models in the B-to-Z transition
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 249-250; doi:10.1093/nass/49.1.249 [Abstract] [PDF] [Request Permissions]

Koji Tsukamoto, Mamiko Odoko, Hirofumi Ohishi, Yoichi Hiyama, Naoyoshi Maezaki, Nobuo Okabe, Tetsuaki Tanaka, and Toshimasa Ishida: Stabilization of the left-handed Z-DNA with monoamines and polyamines
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 251-252; doi:10.1093/nass/49.1.251 [Abstract] [PDF] [Request Permissions]

Jiro Kondo, Boris François, Alexandre Urzhumtsev, and Eric Westhof: Crystallographic studies of Homo sapiens ribosomal decoding A site complexed with aminoglycosides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 253-254; doi:10.1093/nass/49.1.253 [Abstract] [PDF] [Request Permissions]

Keitaro Yoshimoto, Seiichi Nishizawa, Hiroyuki Koshino, Yusuke Sato, Norio Teramae, and Mizuo Maeda: Assignment of hydrogen-bond structure in a ligand-nucleobase complex inside duplex DNA: Combined use of quantum chemical calculations and ¹⁵N NMR experiments
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 255-256; doi:10.1093/nass/49.1.255 [Abstract] [PDF] [Request Permissions]

Satoshi Fujii: Usability of the kink parameters for nucleic acid structure in Database
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 257-258; doi:10.1093/nass/49.1.257 [Abstract] [PDF] [Request Permissions]

Jing-Min Zhou, Yoji Yamamoto, Akihiko Uehara, and Makoto Komiyama: Genetic recombination without using either restriction enzyme or PCR
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 259-260; doi:10.1093/nass/49.1.259 [Abstract] [PDF] [Request Permissions]

Gosuke Hayashi, Masaki Hagihara, and Kazuhiko Nakatani: Application of L-DNA as a molecular tag
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 261-262; doi:10.1093/nass/49.1.261 [Abstract] [PDF] [Request Permissions]

Takashi Ohtsuki, Chisato Kumano, Taishi Manabe, Mizuki Kitamatsu, and Masahiko Sisido: RNA isolation using immobilized PNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 263-264; doi:10.1093/nass/49.1.263 [Abstract] [PDF] [Request Permissions]

Keiichiro Kanatani, Shinsuke Sando, and Yasuhiro Aoyama: A simple approach to sense codon-templated synthesis of natural/unnatural hybrid peptides
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 265-266; doi:10.1093/nass/49.1.265 [Abstract] [PDF] [Request Permissions]

Atsushi Ogawa, Shinsuke Sando, and Yasuhiro Aoyama: In vitro read-through polysome/ribosome display of full-length protein ORF and it's applications
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 267-268; doi:10.1093/nass/49.1.267 [Abstract] [PDF] [Request Permissions]

Atsushi Ogawa, Teruyuki Nishi, Shinsuke Sando, and Yasuhiro Aoyama: In vitro selection of RNA aptamers for the Escherichia coli release factor 1
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 269-270; doi:10.1093/nass/49.1.269 [Abstract] [PDF] [Request Permissions]

Atsushi Narita, Kazumasa Ogawa, Shinsuke Sando, and Yasuhiro Aoyama: Highly sensitive genotyping using artificial riboregulator system
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 271-272; doi:10.1093/nass/49.1.271 [Abstract] [PDF] [Request Permissions]

Kenji Abe, Nobuhiko Sato, Keiichiro Kanatani, Shinsuke Sando, and Yasuhiro Aoyama: Ribosome-catalyzed synthesis of protein/oligopeptides with unnatural backbone
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 273-274; doi:10.1093/nass/49.1.273 [Abstract] [PDF] [Request Permissions]

Masayasu Kuwahara, Takehiro Tamura, Rina Kitagata, Hiroaki Sawai, and Hiroaki Ozaki: Comparison study on PCR amplification of modified DNA by using various kinds of polymerase and modified nucleoside triphosphates
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 275-276; doi:10.1093/nass/49.1.275 [Abstract] [PDF] [Request Permissions]

Yuichiro Aiba, Masao Mori, Yoji Yamamoto, and Makoto Komiyama: Rapid site-selective hydrolysis of double-stranded DNA by use of Ce(IV)/EDTA and PNA bearing phosphate group
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 277-278; doi:10.1093/nass/49.1.277 [Abstract] [PDF] [Request Permissions]

Akihiko Uehara, Yoji Yamamoto, Akira Watanabe, Hiroyuki Aburatani, and Makoto Komiyama: Construction of chimera protein by using artificial restriction DNA cutter
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 279-280; doi:10.1093/nass/49.1.279 [Abstract] [PDF] [Request Permissions]

Yoshihito Kitamura, Satoshi Mori, and Makoto Komiyama: Gene manipulation of fluorescent protein through site-selective hydrolysis by Ce(IV)/EDTA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 281-282; doi:10.1093/nass/49.1.281 [Abstract] [PDF] [Request Permissions]

Mingzhe Liu, Makoto Komiyama, and Hiroyuki Asanuma: Design of light-switchable phage promoter for efficient photo-regulation of gene-expression
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 283-284; doi:10.1093/nass/49.1.283 [Abstract] [PDF] [Request Permissions]

Tsuneo Mitsui, Michiko Kimoto, Shigeyuki Yokoyama, and Ichiro Hirao: Fluorescent properties of an unnatural nucleobase, 2-amino-6-(2-thienyl)purine, in DNA and RNA fragments
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 285-286; doi:10.1093/nass/49.1.285 [Abstract] [PDF] [Request Permissions]

Michiko Kimoto, Rie Kawai, Tsuneo Mitsui, Yoko Harada, Akira Sato, Shigeyuki Yokoyama, and Ichiro Hirao: Site-specific incorporation of fluorescent probes into RNA by specific transcription using unnatural base pairs
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 287-288; doi:10.1093/nass/49.1.287 [Abstract] [PDF] [Request Permissions]

Toyofumi Yamaguchi, Kenta Kazama, Jun Takashima, Tsukasa Ogawara, Saori Iyono, Motoko Inomata, and Mineo Saneyoshi: Influence of long-term treatment with cytosine arabinoside on telomere length in human HL60 cells
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 289-290; doi:10.1093/nass/49.1.289 [Abstract] [PDF] [Request Permissions]

Shunji Izuta and Naomi Nishimoto: The pH-dependent mismatch formation by DNA polymerase ${eta}$
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 291-292; doi:10.1093/nass/49.1.291 [Abstract] [PDF] [Request Permissions]

Toshiaki Nakano, Atsushi Katafuchi, Hiroaki Terato, Toshinori Suzuki, Bennett Van Houten, and Hiroshi Ide: Activity of nucleotide excision repair enzymes for oxanine cross-link lesions
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 293-294; doi:10.1093/nass/49.1.293 [Abstract] [PDF] [Request Permissions]

Mayumi Matsubara, Tamon Tanaka, Hiroaki Terato, and Hiroshi Ide: Action mechanism of human SMUG1 uracil-DNA glycosylase
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 295-296; doi:10.1093/nass/49.1.295 [Abstract] [PDF] [Request Permissions]

Akiko Mizutani, Masato Ohtsuka, Minoru Kimura, Masafumi Tanaka, and Hidetoshi Inoko: An EYFP insertion mutant containing a modified lox sequence for potential use as a recombination indicator
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 297-298; doi:10.1093/nass/49.1.297 [Abstract] [PDF] [Request Permissions]

Koji Okamoto, Atsushi Kuno, and Tsunemi Hasegawa: Recognition sites of glycine tRNA for glycyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 299-300; doi:10.1093/nass/49.1.299 [Abstract] [PDF] [Request Permissions]

Kazunori Watanabe, Osamu Nureki, Shuya Fukai, Yaeta Endo, and Hiroyuki Hori: Structural change of tRNA (Gm18) methyltransferase by binding of methyl donor analogues
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 301-302; doi:10.1093/nass/49.1.301 [Abstract] [PDF] [Request Permissions]

Takako Awai, Toru Takehara, Hiroshi Takeda, and Hiroyuki Hori: Aquifex aeolicus Trm1[tRNA (m²₂G26) methyltransferase] has a novel recognition mechanism of the substrate RNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 303-304; doi:10.1093/nass/49.1.303 [Abstract] [PDF] [Request Permissions]

Yoshinori Tsuchiya, Kazuki Morioka, Isao Taneda, Junsuke Shirai, and Kazuo Yoshida: Gene design of signal sequence for the effective secretion of recombinant protein using insect cell
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 305-306; doi:10.1093/nass/49.1.305 [Abstract] [PDF] [Request Permissions]

Yukari Nagatoyo, Jun Iwaki, Satoko Suzuki, Atsushi Kuno, and Tsunemi Hasegawa: Molecular recognition of histidine tRNA by histidyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 307-308; doi:10.1093/nass/49.1.307 [Abstract] [PDF] [Request Permissions]

Seiya Watanabe, Tsutomu Kodaki, and Keisuke Makino: L-Arabinose 1-dehydrogenase: A novel enzyme involving in bacterial L-arabinose metabolism
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 309-310; doi:10.1093/nass/49.1.309 [Abstract] [PDF] [Request Permissions]

Mitsuru Nonogawa, Toshiyuki Arai, Nobuyuki Endo, Seung Pil Pack, Tsutomu Kodaki, and Keisuke Makino: Hydrogen bond removal of pterin derivative whose structure is similar to nucleic acid bases
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 311-312; doi:10.1093/nass/49.1.311 [Abstract] [PDF] [Request Permissions]

Xianglan Li, Hidetoshi Nishizuka, Kota Tsutsumi, Yuka Imai, Yasuyuki Kurihara, and Seiichi Uesugi: Effects on telomerase activity of the 5'-termianl region of human telomerase RNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 313-314; doi:10.1093/nass/49.1.313 [Abstract] [PDF] [Request Permissions]

Takayuki Kosaka, Takatoshi Ozawa, Rie Yatsunami, Toshiaki Fukui, and Satoshi Nakamura: Molecular cloning of transducer gene hjtB from extremely halophilic archaeon Haloarcula japonica
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 315-316; doi:10.1093/nass/49.1.315 [Abstract] [PDF] [Request Permissions]

Kazuyuki Takai: Possible conformations of 5-aminomethyluridine derivatives recognizing a G at the third position of the codon
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 317-318; doi:10.1093/nass/49.1.317 [Abstract] [PDF] [Request Permissions]

Shin-ichi Makino, Tatsuya Sawasaki, Yaeta Endo, and Kazuyuki Takai: Purification and sequence determination of an RNA ligase from wheat embryos
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 319-320; doi:10.1093/nass/49.1.319 [Abstract] [PDF] [Request Permissions]

Hidetaka Torigoe and Yusuke Tsukamoto: Development of triplex formation-based artificial transcription factor to recognize any upstream sequence of target genes
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 321-322; doi:10.1093/nass/49.1.321 [Abstract] [PDF] [Request Permissions]

Nobutada Tanaka, Masayuki Nakanishi, Yoshio Kusakabe, Yoshikuni Goto, Yukio Kitade, and Kazuo T. Nakamura: Molecular basis for recognition of 2',5'-linked oligoadenylates by the N-terminal ankyrin repeat domain of human ribonuclease L
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 323-324; doi:10.1093/nass/49.1.323 [Abstract] [PDF] [Request Permissions]

Nobuyuki Morohashi, Aaron P. Mitchell, and Mitsuhiro Shimizu: Effect of histone methyltransferase gene mutations on sporulation in S. cerevisiae
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 325-326; doi:10.1093/nass/49.1.325 [Abstract] [PDF] [Request Permissions]

Etsuko Kawashima, Yusuke Ohba, Yusuke Terui, and Kazuo Kamaike: Design, synthesis and evaluation of oligomer conjugated MGBpolyamide-nucleoside hybrid as a novel gene expression control compound
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 327-328; doi:10.1093/nass/49.1.327 [Abstract] [PDF] [Request Permissions]

Sung Won Choi, Kaoru Takada, Junji Mochida, Asako Yamayosh, Arihiro Kano, and Atsushi Maruyama: The molecular structure effect of cationic comb-type copolymers on nucleic acid chaperone activity
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 329-330; doi:10.1093/nass/49.1.329 [Abstract] [PDF] [Request Permissions]

Maiko Higuchi, Asako Yamayoshi, Akio Kobori, Tetsuji Yamaoka, and Akira Murakami: Synthesis and properties of photo-reactive antisense oligonucleotides containing 2'-O-psoralen-conjugated adenosine
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 331-332; doi:10.1093/nass/49.1.331 [Abstract] [PDF] [Request Permissions]

Kengo Takamori, Takanori Kubo, Zhivko Zhelev, Bakalova Rumiana, Hideki Ohba, Keiko Doi, and Masayuki Fujii: Suppression of bcr/abl chimeric gene by conjugate DNA enzymes in human cells
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 333-334; doi:10.1093/nass/49.1.333 [Abstract] [PDF] [Request Permissions]

Naoto Tsuda, Ayumi Matsumoto, Aya Ito, Tomomi Uneda, Atsuhiro Tanabe, Satoshi Obika, and Takeshi Imanishi: Antigene-block strategy: Effective regulation of gene expression by 2',4'-BNA-modified TFOs with an additional stem-loop structure
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 335-336; doi:10.1093/nass/49.1.335 [Abstract] [PDF] [Request Permissions]

Takanori Kubo, Rumiana Bakalova, Zhivko Zhelev, Hideki Ohba, and Masayuki Fujii: Highly sensitive inhibition of hTERT mRNA expression and telomerase activity by DNA-signal-peptide conjugates
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 337-338; doi:10.1093/nass/49.1.337 [Abstract] [PDF] [Request Permissions]

Hitoshi Suzuki, Hiroyasu Kaneko, Nobushige Tamai, Naoko Miyano-Kurosaki, Kahoko Hashimoto, Kunitada Shimotohno, and Hiroshi Takaku: Suppression of HCV RNA replication by baculovirus-mediated shRNA expression
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 339-340; doi:10.1093/nass/49.1.339 [Abstract] [PDF] [Request Permissions]

Yoko Fukuda, Hiroaki Kawasaki, and Kazunari Taira: Exploration of human miRNA target genes in neuronal differentiation
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 341-342; doi:10.1093/nass/49.1.341 [Abstract] [PDF] [Request Permissions]

Terumichi Tanaka, Naomi Kanda, and Yo Kikuchi: Regulation of ribozyme activity by engineered protein switch
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 343-344; doi:10.1093/nass/49.1.343 [Abstract] [PDF] [Request Permissions]

Mayumi Amano: Effect of the conserved bases G10.1C11.1 in the stem II on Y-shape conformation of Hammerhead ribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 345-346; doi:10.1093/nass/49.1.345 [Abstract] [PDF] [Request Permissions]

Eugeny M. Zubin, Dmitry A. Stetsenko, Anna V. Kachalova, Michael J. Gait, and Tatiana S. Oretskaya: Incorporation of side-chain groups of basic amino acids into oligonucleotides via the 2'-position of uridine
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 347-348; doi:10.1093/nass/49.1.347 [Abstract] [PDF] [Request Permissions]

Shohei Kuramitsu, Yoshiya Ikawa, and Tan Inoue: Rational installation of an allosteric effector on a designed ribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 349-350; doi:10.1093/nass/49.1.349 [Abstract] [PDF] [Request Permissions]

Shoji P Ohuchi, Takashi Ohtsu, and Yoshikazu Nakamura: A novel method to generate aptamers against recombinant targets displayed on the cell surface
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 351-352; doi:10.1093/nass/49.1.351 [Abstract] [PDF] [Request Permissions]

Junji Kawakami, Hisanori Tokitoh, Yoshiatsu Tanabe, and Naoki Sugimoto: Specific recognition of the basic N peptide by an RNA
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 353-354; doi:10.1093/nass/49.1.353 [Abstract] [PDF] [Request Permissions]

Masatora Fukuda, Yukiko Tanabe, and Takashi Morii: Stepwise functionalization of ribonucleopeptide complexes to receptors and sensors
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 355-356; doi:10.1093/nass/49.1.355 [Abstract] [PDF] [Request Permissions]

Takahisa Noma, Kazunori Ikebukuro, Koji Sode, Takuya Ohkubo, Yuji Sakasegawa, Naomi Hachiya, and Kiyotoshi Kaneko: Screening of DNA aptamers against multiple proteins in tissue
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 357-358; doi:10.1093/nass/49.1.357 [Abstract] [PDF] [Request Permissions]

Teru Kato, Atsuko Yuki, Kazuyoshi Yano, Yoshiko Arikawa, and Isao Karube: SNPs (single nucleotide polymorphisms) detection based on the formation of cholic-acid binding DNA aptamer
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 359-360; doi:10.1093/nass/49.1.359 [Abstract] [PDF] [Request Permissions]

Satoru Sekiya, Fumiko Nishikawa, Ken Noda, P.K.R. Kumar, Takashi Yokoyama, and Satoshi Nishikawa: In vitro selection of RNA aptamers against cellular and abnormal isoform of mouse prion protein
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 361-362; doi:10.1093/nass/49.1.361 [Abstract] [PDF] [Request Permissions]

Mizuki Kitamatsu, Tomoko Kashiwagi, and Masahiko Sisido: Synthesis of a newly peptide nucleic acid that contains tertiary amino groups
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 363-364; doi:10.1093/nass/49.1.363 [Abstract] [PDF] [Request Permissions]

Tomoko Hashimoto, Akio Kobori, Akira Murakami, and Tetsuji Yamaoka: The destabilization of polyplexes facilitates intranuclear transcription efficiency
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 365-366; doi:10.1093/nass/49.1.365 [Abstract] [PDF] [Request Permissions]

Bethany A. Janowski and David R. Corey: Inhibiting transcription of chromosomal DNA using antigene RNAs
NUCLEIC ACIDS SYMP SER (OXF) 2005 49: 367-368; doi:10.1093/nass/49.1.367 [Abstract] [PDF] [Request Permissions]

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