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Contents: No. 51, November 2007   [Index by Author] 

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Fifth International Symposium on Nucleic Acids Chemistry

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Akihiro Ohkubo, Yasuhiro Noma, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine
Development of an N-unprotected phosphoramidite method for the chemical synthesis of aminoacylated RNAs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 1-2; doi:10.1093/nass/nrm001 [Abstract] [PDF] [Request Permissions]  

Hirofumi Masuda, Yoshinobu Shiba, Naoki Watanabe, Kazuchika Takagaki, Kouichi Ishiyama, Tadaaki Ohgi, and Junichi Yano
Chemical synthesis of a very long RNA oligomer, a 110mer precursor-miRNA candidate, with 2-cyanoethoxymethyl (CEM) as the 2'-O-protecting group
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 3-4; doi:10.1093/nass/nrm002 [Abstract] [PDF] [Request Permissions]  

Kazumitsu Onizuka, Yosuke Taniguchi, and Shigeki Sasaki
Development of novel thioguanosine analogs with the ability to specifically modify cytidine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 5-6; doi:10.1093/nass/nrm003 [Abstract] [PDF] [Request Permissions]  

Kazuo Shinozuka, Tohru Sekiguchi, Yumiko Ebara, and Tomohisa Moriguchi
Synthesis, Duplex-forming Ability and Fluorescent Property of OligoDNA Bearing Silylated Fluorophore
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 7-8; doi:10.1093/nass/nrm004 [Abstract] [PDF] [Request Permissions]  

Ichiro Hirao, Tsuneo Mitsui, Michiko Kimoto, and Shigeyuki Yokoyama
Development of an unnatural base pair for efficient PCR amplification
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 9-10; doi:10.1093/nass/nrm005 [Abstract] [PDF] [Request Permissions]  

Hiromu Kashida, Taiga Fujii, and Hiroyuki Asanuma
Construction of novel dye aggregates based on "comb-type" sequence
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 11-12; doi:10.1093/nass/nrm006 [Abstract] [PDF] [Request Permissions]  

Dieter Söll
The Genetic Code Revisited — Four Decades after Francis Crick
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 13-14; doi:10.1093/nass/nrm007 [PDF] [Request Permissions]  

Henri Grosjean, Christian Marck, and Valerie de Crécy-Lagard
The various strategies of codon decoding in organisms of the three domains of Life: evolutionary implications
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 15-16; doi:10.1093/nass/nrm008 [Abstract] [PDF] [Request Permissions]  

Krishna N Ganesh, A. Gourishankar, Raman Vysabhattar, and Pradnya Bokil
Property editing of peptide nucleic acids (PNA): gem-dimethyl, cyanuryl and 8-aminoadenine PNAs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 17-18; doi:10.1093/nass/nrm009 [Abstract] [PDF] [Request Permissions]  

Stefano Sforza, Tullia Tedeschi, Roberto Corradini, and Rosangela Marchelli
A new concept in double duplex DNA invasion by chiral PNAs which simultaneously depress PNA-PNA and improve PNA-DNA duplex stability.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 19-20; doi:10.1093/nass/nrm010 [Abstract] [PDF] [Request Permissions]  

Takehiko Wada, Yoshiki Maeda, Nobuya Sawa, Hirofumi Sato, Hyongi Chon, Shigenori Kanaya, and Yoshihisa Inoue
Synthesis of Peptide Ribonucleic Acid (PRNA)-DNA Chimera and Interaction with DNA and RNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 21-22; doi:10.1093/nass/nrm011 [Abstract] [PDF] [Request Permissions]  

Yoshio Saito, Subhendu Sekhar Bag, Satoshi Kodate, and Isamu Suzuka
Design of dual-labeled oligonucleotide probes for SNPs genotyping
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 23-24; doi:10.1093/nass/nrm012 [Abstract] [PDF] [Request Permissions]  

Masahiro Mizuta, Jun-ichi Banba, Takashi Kanamori, Akihiro Ohkubo, Mitsuo Sekine, and Kohji Seio
Recognition of triplex forming oligodeoxynucleotides incorporating abasic sites by 5-arylcytosine residues in duplex DNAs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 25-26; doi:10.1093/nass/nrm013 [Abstract] [PDF] [Request Permissions]  

Akimitsu Okamoto, Kazuo Tanaka, Kazuki Tainaka, Tadashi Umemoto, and Akiko Nomura
DNA methylation analysis using metal complex formation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 27-28; doi:10.1093/nass/nrm014 [Abstract] [PDF] [Request Permissions]  

Rakesh N. Veedu, Birte Vester, and Jesper Wengel
Novel Applications of Locked Nucleic Acids
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 29-30; doi:10.1093/nass/nrm015 [Abstract] [PDF] [Request Permissions]  

Vladimir L. Malinovskii, Holger Bittermann, and Robert Häner
Self-Organization of Polyaromatic Compounds within DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 31-32; doi:10.1093/nass/nrm016 [Abstract] [PDF] [Request Permissions]  

Kazuteru Usui, Mariko Aso, Mitsuhiro Fukuda, Yukiko Toguchi, and Hiroshi Suemune
The photoreactivity of the caged precursors of oligonucleotides containing C4’-oxidized abasic site and reaction of the generated lesion
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 33-34; doi:10.1093/nass/nrm017 [Abstract] [PDF] [Request Permissions]  

Masafumi Minoshima, Shunta Sasaki, Jun Fujimoto, Ken-ichi Shinohara, Toshikazu Bando, and Hiroshi Sugiyama
Synthesis and biological properties of pyrrole-imidazole polyamide conjugates
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 35-36; doi:10.1093/nass/nrm018 [Abstract] [PDF] [Request Permissions]  

Yuichi Ohya, Takayuki Nishi, Tomoyoshi Nohori, Souya Jo, Koji Ohta, Kenta Jozuka, and Tatsuro Ouchi
Construction of supramolecular assemblies and self-organized structures using oligo-DNAs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 37-38; doi:10.1093/nass/nrm019 [Abstract] [PDF] [Request Permissions]  

Vladimir Gubala, María del C. Rivera-Sánchez, Gerard Hobley, and José M. Rivera
The impact of 8-aryl-and 8-heteroaryl-2'-deoxyguanosine derivatives on G-quadruplex formation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 39-40; doi:10.1093/nass/nrm020 [Abstract] [PDF] [Request Permissions]  

Asuteka Nagao, Takeo Suzuki, and Tsutomu Suzuki
Aminoacyl-tRNA surveillance by EF-Tu in mammalian mitochondria.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 41-42; doi:10.1093/nass/nrm021 [Abstract] [PDF] [Request Permissions]  

Daisuke Kurita, Takayuki Konno, Kazuma Takada, Akira Muto, and Hyouta Himeno
Molecular mechanism of trans-translation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 43-44; doi:10.1093/nass/nrm022 [Abstract] [PDF] [Request Permissions]  

Shuntaro Takahashi, Hiroyuki Furusawa, Yoshihiro Shimizu, Takuya Ueda, and Yoshio Okahata
Kinetic analysis of the effects of translation enhancers in translation initiation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 45-46; doi:10.1093/nass/nrm023 [Abstract] [PDF] [Request Permissions]  

Hikoya Hayatsu, Kazuo Negishi, Masahiko Shiraishi, Katsumi Tsuji, and Kei Moriyama
Chemistry of Bisulfite Genomic Sequencing; Advances and Issues
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 47-48; doi:10.1093/nass/nrm024 [Abstract] [PDF] [Request Permissions]  

ChinWei Yung, Tetsuya Suzuki, Yoji Okugawa, Asako Kawakami, David Loakes, Kazuo Negishi, and Tomoe Negishi
Nucleotide incorporation against 7,8-dihydro-8-oxoguanine is influenced by neighboring base sequences in TLS DNA polymerase reaction
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 49-50; doi:10.1093/nass/nrm025 [Abstract] [PDF] [Request Permissions]  

Tetsuya Suzuki, Kazuo Yamamoto, Hideyoshi Harashima, and Hiroyuki Kamiya
Base excision repair system suppresses mutagenesis caused by 8-hydroxy-dGTP in Escherichia coli
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 51-52; doi:10.1093/nass/nrm026 [Abstract] [PDF] [Request Permissions]  

Seung Pil Pack, Akihiro Doi, Nagendra Kumar Kamisetty, Mitsuru Nonogawa, Tsutomu Kodaki, and Keisuke Makino
Functional reactivity of oxanine: its biological meanings and biotechnological applications
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 53-54; doi:10.1093/nass/nrm027 [Abstract] [PDF] [Request Permissions]  

Jun-ichi Nagashima, Satoshi Minezaki, Satoshi Obika, Takeshi Imanishi, Masayasu Kuwahara, and Hiroaki Sawai
Polymerisation of a DNA strand using oligo-DNA template with modified bases, sugars and phosphates
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 55-56; doi:10.1093/nass/nrm028 [Abstract] [PDF] [Request Permissions]  

Naonori Inoue, Aki Shionoya, Naoki Ogawa, and Akira Matsuda
Amplification of 4’-thioDNA and its utility as a shRNA expression system
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 57-58; doi:10.1093/nass/nrm029 [Abstract] [PDF] [Request Permissions]  

Hiroshi Sugiyama
Chemical biology that controls DNA structure and function
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 59-60; doi:10.1093/nass/nrm030 [Abstract] [PDF] [Request Permissions]  

S. Milton, M. Murtola, J. Sandbrink, E. Yeheskiely, and R. Strömberg
Making Oligonucleotide Conjugates and Breaking Oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 61; doi:10.1093/nass/nrm031 [Abstract] [PDF] [Request Permissions]  

Gary B. Evans, Richard H. Furneaux, Peter M. Kelly, Vern L. Schramm, and Peter C. Tyler
Transition State Analogue Inhibitors of N-Ribosyltransferases: New Drugs by Targeting Nucleoside Processing Enzymes.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 63-64; doi:10.1093/nass/nrm032 [Abstract] [PDF] [Request Permissions]  

Qi Wang, Teija Niittymäki, Pasi Virta, Kaisa Ketomäki, Satu Mikkola, and Harri Lönnberg
Metal ion promoted cleavage of RNA phosphodiester bonds: from Zn(II) aqua ion to artificial ribonucleases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 65-66; doi:10.1093/nass/nrm033 [Abstract] [PDF] [Request Permissions]  

Flavio Manea, Lucia Pasquato, Leonard J. Prins, and Paolo Scrimin
Multivalent Catalysts for the Cleavage of Nucleic Acids and their Models
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 67-68; doi:10.1093/nass/nrm034 [Abstract] [PDF] [Request Permissions]  

Jyoti Chattopadhyaya
Conformationally-2',4'-Locked Aza-ENA and Carbocyclic ribo-Thymidine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 69-70; doi:10.1093/nass/nrm035 [Abstract] [PDF] [Request Permissions]  

Shu-ichi Nakano, Kazuya Uenishi, Masayuki Fujii, and Naoki Sugimoto
The base-pairing ability of the base pair-mimic nucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 71-72; doi:10.1093/nass/nrm036 [Abstract] [PDF] [Request Permissions]  

Longliang Wu, Naohiko Shimada, Arihiro Kano, and Atsushi Maruyama
Effect of poly(L-lysine)-g-dextran copolymers on DNA hybridization
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 73-74; doi:10.1093/nass/nrm037 [Abstract] [PDF] [Request Permissions]  

Yoshiyuki Tanaka, Shuji Oda, Hiroshi Yamaguchi, Kaichiro Haruta, Takuya Kawamura, Yoshinori Kondo, Tomomi Uchiyama, Miura Takashi, Hideo Takeuchi, Hidetaka Torigoe, Chojiro Kojima, and Akira Ono
Structural and physicochemical features on the metal-mediated base pairs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 75-76; doi:10.1093/nass/nrm038 [Abstract] [PDF] [Request Permissions]  

Takako Ohyama, Ayako Furukawa, Tatsuya Miyoshi, Yuusuke Takada, Shouta Ohgara, Kazuyuki Hiratsuka, Takao Imai, Hideyuki Okano, Hitoshi Nakagama, Takashi Nagata, and Masato Katahira
Interactions with RNA/DNA of proteins involved in the regulation of transcription, translation and telomere elongation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 77-78; doi:10.1093/nass/nrm039 [Abstract] [PDF] [Request Permissions]  

Junpei Yamamoto, Yoshiyuki Tanaka, Kenichi Hitomi, Elizabeth D. Getzoff, and Shigenori Iwai
Spectroscopic studies on a novel intramolecular hydrogen bond within the (6–4) photoproduct
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 79-80; doi:10.1093/nass/nrm040 [Abstract] [PDF] [Request Permissions]  

Andreas Marx, Daniel Summerer, Katharina B. M. Sauter, Christian Gloeckner, and Nicolas Z. Rudinger
Chemical Biology of DNA Polymerases: From Selectivity to New Functions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 81-82; doi:10.1093/nass/nrm041 [Abstract] [PDF] [Request Permissions]  

Peter A. Beal, Olena Maydanovych, and Subhash Pokharel
The Chemistry and Biology of RNA editing by Adenosine Deaminases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 83-84; doi:10.1093/nass/nrm042 [Abstract] [PDF] [Request Permissions]  

Shinobu Sato, Keiichi Ohtsuka, and Shigeori Takenaka
Searching study for the suitable ferrocenylnaphthalene diimide derivative in the electrochemical telomerase assay
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 85-86; doi:10.1093/nass/nrm043 [Abstract] [PDF] [Request Permissions]  

Takahiko Nojima, Shohei Kaneda, and Teruo Fujii
Application of on-chip capillary electrophoresis to cell-free preparation of recombinant DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 87-88; doi:10.1093/nass/nrm044 [Abstract] [PDF] [Request Permissions]  

Md. Masudur Rahman, Hachiro Yasuda, Kazunori Takashima, and Akira Mizuno
Binding Effect of the Antitumor Active Dirhodium (II) Compounds to Plasmid DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 89-90; doi:10.1093/nass/nrm045 [Abstract] [PDF] [Request Permissions]  

Asako Yamayoshi, Noriko Shimazu, Maiko Higuchi, Akio Kobori, and Akira Murakami
Gene regulation by decoy approach (II): Development of photo-cross-linked oligonucleotides duplex as a decoy DNA for estrogen receptor
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 91-92; doi:10.1093/nass/nrm046 [Abstract] [PDF] [Request Permissions]  

Gosuke Hayashi, Masaki Hagihara, Chikara Dohno, and Kazuhiko Nakatani
Reversible regulation of binding between a photoresponsive peptide and its RNA aptamer
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 93-94; doi:10.1093/nass/nrm047 [Abstract] [PDF] [Request Permissions]  

Hironori Hayashi, Masafumi Inoue, and Takashi Morii
Structure-based Design of Fluorescent Biosensors from Ribonucleopeptide Complexes
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 95-96; doi:10.1093/nass/nrm048 [Abstract] [PDF] [Request Permissions]  

Teru Kato, Saori Kamoto, Masumi Hyuga, and Isao Karube
SNPs typing based on the formation of fluorescent signaling DNA aptamers which bind to bile acids
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 97-98; doi:10.1093/nass/nrm049 [Abstract] [PDF] [Request Permissions]  

Wataru Yoshida, Koji Sode, and Kazunori Ikebukuro
Aptameric enzyme subunit for homogeneous protein sensing
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 99-100; doi:10.1093/nass/nrm050 [Abstract] [PDF] [Request Permissions]  

Kozo Tomita, Tomoyuki Numata, Tsutomu Fukai, Shuya Nureki, Ryuichiro Ishitani, and Osamu Nureki
Animated Crystallography of Genetic Code Translation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 101-102; doi:10.1093/nass/nrm051 [Abstract] [PDF] [Request Permissions]  

Thomas Carell, Patrick Cramer, and Karl-Peter Hopfner
The chemistry of transcription through damaged DNA and of translesion synthesis at atomic resolution
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 103; doi:10.1093/nass/nrm052 [PDF] [Request Permissions]  

Small regulatory RNAs: biogenesis & functions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 105; doi:10.1093/nass/nrm053 [PDF] [Request Permissions]  

Shankar Balasubramanian
Massively Parallel Synthetic Sequencing of DNA on Clonal Arrays
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 107; doi:10.1093/nass/nrm054 [PDF] [Request Permissions]  

Satoshi Shuto
Design, synthesis, and biological activity of carbocyclic analogues of cyclic ADP-ribose, a Ca2+-mobilizing second messenger
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 109-110; doi:10.1093/nass/nrm055 [Abstract] [PDF] [Request Permissions]  

Makoto Koizumi, Miho Takagi-Sato, Ryo Okuyama, Kazushi Araki, Weiyong Sun, and Daisuke Nakai
In vivo antisense activity of ENA® oligonucleotides targeting PTP1B mRNA in comparison of that of 2'-MOE-modified oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 111-112; doi:10.1093/nass/nrm056 [Abstract] [PDF] [Request Permissions]  

Somjing Roongjang, Kurena Takahashi, Satoshi Obika, and Takeshi Imanishi
Inhibition of bcl-xLexpression by antisense oligonucleotides containing various bridged nucleic acids (BNAs)
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 113-114; doi:10.1093/nass/nrm057 [Abstract] [PDF] [Request Permissions]  

Masaki Ohuchi, Hiroshi Murakami, and Hiroaki Suga
Insitugeneration of aminoacyltRNAs assisted by ribozymes in translation apparatus
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 115-116; doi:10.1093/nass/nrm058 [Abstract] [PDF] [Request Permissions]  

Barbara Ramsay Shaw
Versatility of borane nucleic acids mimics for coding, decoding and modulating genetic information
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 117; doi:10.1093/nass/nrm059 [Abstract] [PDF] [Request Permissions]  

Takeshi Wada, Tomoaki Kondo, Satoshi Fujiwara, Terutoshi Sato, and Natsuhisa Oka
Chemical synthesis and properties of stereoregulated phosphorothioate RNAs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 119-120; doi:10.1093/nass/nrm060 [Abstract] [PDF] [Request Permissions]  

Shoko Waki, Kazutoshi Yoshitake, Ryohei Iwasaki, and Hiroshi Ueda
Fluorosensor proteins to detect specific DNA sequences in living bacteria
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 121-122; doi:10.1093/nass/nrm061 [Abstract] [PDF] [Request Permissions]  

Takuma Katayama, Norikazu Inoue, and Hidetaka Torigoe
Location of the triplex DNA-binding domain of Saccharomyces cerevisiae Stm1 protein
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 123-124; doi:10.1093/nass/nrm062 [Abstract] [PDF] [Request Permissions]  

Jafar Sharif, Michiyo Nakamura, Takuya Ito, Yoshitaka Kimura, Teruyuki Nagamune, Kohzoh Mitsuya, and Kunihiro Okamura
Food Restriction in Pregnant Mice Can Induce Changes in Histone Modifications and Suppress Gene Expression in Fetus
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 125-126; doi:10.1093/nass/nrm063 [Abstract] [PDF] [Request Permissions]  

Tamaki Endoh, Masahiko Sisido, and Takashi Ohtsuki
Photo inducible RNA interference using cell permeable protein carrier
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 127-128; doi:10.1093/nass/nrm064 [Abstract] [PDF] [Request Permissions]  

Miyuki Shiraishi, Eri Utagawa, Akihiro Ohkubo, Mitsuo Sekine, and Kohji Seio
Short-step chemical synthesis of DNA by use of MMTrS group for protection of 5'– hydroxyl group
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 129-130; doi:10.1093/nass/nrm065 [Abstract] [PDF] [Request Permissions]  

Akihiro Ohkubo, Rintaro Kasuya, Kenichi Miyata, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine
Development of a new method for the synthesis of oligodeoxynucleotides by use of carbamoyl-type protecting groups
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 131-132; doi:10.1093/nass/nrm066 [Abstract] [PDF] [Request Permissions]  

Renpei Higashida, Toshihide Kawanaka, Natsuhisa Oka, and Takeshi Wada
Nucleoside H-boranophosphonates: Synthesis and properties of a new class of nucleotide analogs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 133-134; doi:10.1093/nass/nrm067 [Abstract] [PDF] [Request Permissions]  

Reiko Iwase and Takaaki Toyama
Synthesis of a guanosine phosphoramidite derivative containing a photocleavable protecting group at the O6 position via regioselective protection of the 2'-hydroxy group with a TBDMS group
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 135-136; doi:10.1093/nass/nrm068 [Abstract] [PDF] [Request Permissions]  

Hiroaki Ozaki, Takahiro Setaka, Syouta Tsuchiya, Takeshi Kawai, Masayasu Kuwahara, and Hiroaki Sawai
Synthesis of novel fluorescent nucleoside bearing 3aminobenzonitrile as a nucleobase
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 137-138; doi:10.1093/nass/nrm069 [Abstract] [PDF] [Request Permissions]  

Yusuke Inagaki, Noriaki Minakawa, and Akira Matsuda
Synthesis of 4'selenoribo nucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 139-140; doi:10.1093/nass/nrm070 [Abstract] [PDF] [Request Permissions]  

Akimasa Matsugami, Takako Ohyama, Masashi Inada, Naonori Inoue, Noriaki Minakawa, Akira Matsuda, and Masato Katahira
Structure of 4'-thioDNA which exhibits endonuclease resistance
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 141-142; doi:10.1093/nass/nrm071 [Abstract] [PDF] [Request Permissions]  

Kazuhiro Haraguchi, Hiromitsu Matsui, Shin Takami, and Hiromichi Tanaka
Additive Pummerer reaction of 3,5-O-(di-t-butylsilylene)-4-thio-furanoid glycal and stereoselective synthesis of _ -anomer of 4’-thioribonucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 143-144; doi:10.1093/nass/nrm072 [Abstract] [PDF] [Request Permissions]  

Hiroki Kumamoto and Hiromichi Tanaka
Synthesis of 5'-branched neplanocin A analogues based on radical-mediated sulfur-extrusive stannylation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 145-146; doi:10.1093/nass/nrm073 [Abstract] [PDF] [Request Permissions]  

Yoshio Saito, Katsuhiko Matsumoto, Subhendu Sekhar Bag, Shinji Ogasawara, Isamu Suzuka, and Isao Saito
Synthesis of C8-alkylamino substituted 2'-deoxyguanosine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 147-148; doi:10.1093/nass/nrm074 [Abstract] [PDF] [Request Permissions]  

Malgorzata Wenska, Stefan Milton, and Roger Strömberg
Clickable 2'-O-Alkyladenosine Building Blocks
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 149-150; doi:10.1093/nass/nrm075 [Abstract] [PDF] [Request Permissions]  

Hirohito Oka, Shu-ichi Nakano, Yuuki Uotani, Kazuya Uenishi, Masayuki Fujii, and Naoki Sugimoto
Functionalization of DNA by the base pair-mimic nucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 151-152; doi:10.1093/nass/nrm076 [Abstract] [PDF] [Request Permissions]  

A.T.M. Zafrul Azam, Itaru Okamoto, and Akira Ono
Synthesis and properties of DNA duplexes containing cytosine analogs carrying phosphodiester functions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 153-154; doi:10.1093/nass/nrm077 [Abstract] [PDF] [Request Permissions]  

Kensaku Sugaya, Yasuki Harada, Yasunori Mitsuoka, Tomohisa Osaki, Satoshi Obika, Tetsuya Kodama, and Takeshi Imanishi
Synthesis and properties of a 2'-deoxy analogue of trans-3',4'-BNA with an S-type sugar conformation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 155-156; doi:10.1093/nass/nrm078 [Abstract] [PDF] [Request Permissions]  

Masaru Nishida, Tetsuya Kodama, Satoshi Obika, and Takeshi Imanishi
Synthesis and chemical properties of a novel 2',4'-bridged nucleic acid analogue with a seven-membered cyclic carbamate structure
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 157-158; doi:10.1093/nass/nrm079 [Abstract] [PDF] [Request Permissions]  

Tetsuya Kodama, Chieko Matsuo, Hidetsugu Ori, Satoshi Obika, Kazuyuki Miyashita, and Takeshi Imanishi
Synthesis and evaluation of a novel 2',5'-bridged nucleic acid with sugar conformation fixed to S-type by N-Olinkage
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 159-160; doi:10.1093/nass/nrm080 [Abstract] [PDF] [Request Permissions]  

Hidetaka Torigoe and Nobuyuki Nagasawa
Effect of ENA modification of triplex-forming oligonucleotide on pyrimidine motif triplex formation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 161-162; doi:10.1093/nass/nrm081 [Abstract] [PDF] [Request Permissions]  

Mariko Aso, John Walter Mirc, Manami Kurita, Noboru Koga, and Hiroshi Suemune
Studies on DNA dynamics using 2-N-tert-butylaminoxylpurines
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 163-164; doi:10.1093/nass/nrm082 [Abstract] [PDF] [Request Permissions]  

Masanori Sumino, Okamoto Itaru, Akihiro Ohkubo, Haruhiko Taguchi, Kohji Seio, and Mitsuo Sekine
Synthesis and properties of oligodeoxynucleotides incorporating 5-carboxydeoxycytidine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 165-166; doi:10.1093/nass/nrm083 [Abstract] [PDF] [Request Permissions]  

Kaori Nakamura, Hisae Karimata, Tatsuo Ohmichi, Daisuke Miyoshi, and Naoki Sugimoto
Effects of cosolutes on the thermodynamic stability of parallel DNA duplex and triplex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 167-168; doi:10.1093/nass/nrm084 [Abstract] [PDF] [Request Permissions]  

Xingguo Liang, Nobutaka Takenaka, Hidenori Nishioka, and Hiroyuki Asanuma
Photoregulation of DNA hybridization by introducing an azobenzene: Molecular design for more stabilization of DNA duplex with cis-azobenzene than with its trans-form
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 169-170; doi:10.1093/nass/nrm085 [Abstract] [PDF] [Request Permissions]  

Hiroshi Itoh, Hidenori Nishioka, Xingguo Liang, and Hiroyuki Asanu
Development of photoresponsive RNA towards photos witch ing of RNA functions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 171-172; doi:10.1093/nass/nrm086 [Abstract] [PDF] [Request Permissions]  

Shin-nosuke Uno, Chikara Dohno, Mika Oku, and Kazuhiko Nakatani
Reversible control of DNA hybridization by photoresponsive ligands
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 173-174; doi:10.1093/nass/nrm087 [Abstract] [PDF] [Request Permissions]  

Tadashi Umemoto, Kazuki Tainaka, Kazuo Tanaka, and Akimitsu Okamoto
Chemistry of Osmium-DNA complexes
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 175-176; doi:10.1093/nass/nrm088 [Abstract] [PDF] [Request Permissions]  

Kumiko Sugiyama, Yoshihiko Kageyama, Itaru Okamoto, and Akira Ono
Preparation and metal ion-binding of 4-N-substituted cytosine pairs in DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 177-178; doi:10.1093/nass/nrm089 [Abstract] [PDF] [Request Permissions]  

Koji Yanagida, Nagisa Hamochi, Kenichi Sasano, Itaru Okamoto, and Akira Ono
Preparation of DNA double helical structures containing both mercury and silver ions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 179-180; doi:10.1093/nass/nrm090 [Abstract] [PDF] [Request Permissions]  

Kenji Iwamoto, Kosei Hayashi, Yuko Watanabe, Itaru Okamoto, and Akira Ono
Synthesis of DNA duplexes containing complexes of 5-modified pyrimidine bases and metal ions
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 181-182; doi:10.1093/nass/nrm091 [Abstract] [PDF] [Request Permissions]  

Hidetaka Torigoe, Tetsuo Kozasa, and Akira Ono
The specific interaction between two C:C mismatch base pairs and silver (I) cation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 183-184; doi:10.1093/nass/nrm092 [Abstract] [PDF] [Request Permissions]  

Hidetaka Torigoe, Yukako Miyakawa, Tetsuo Kozasa, and Akira Ono
The specific interaction between two T:T mismatch base pairs and mercury (II) cation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 185-186; doi:10.1093/nass/nrm093 [Abstract] [PDF] [Request Permissions]  

Kaichiro Haruta, Yoshiyuki Tanaka, Takuya Kawamura, Yoshinori Kondo, Akira Ono, Hiroyuki Yamakoshi, Naoki Kanoh, and Yoshiharu Iwabuchi
Synthesis of an enantiomeric DNA oligomer and its T-HgII-T base-pair formation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 187-188; doi:10.1093/nass/nrm094 [Abstract] [PDF] [Request Permissions]  

Koji Takahashi, Kazuma Fukiura, Hidekazu Arii, and Makoto Chikira
Design of Salen-Type Ni(II) Complexes for Recognition of DNA Base Sequence
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 189-190; doi:10.1093/nass/nrm095 [Abstract] [PDF] [Request Permissions]  

Sadayoshi Watanabe, Keiichi Ohtsuka, and Shigeori Takenaka
Further stabilization of the double stranded DNA complex by naphthalene diimide derivative having 2,2-dipicolylamine-zinc complex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 191-192; doi:10.1093/nass/nrm096 [Abstract] [PDF] [Request Permissions]  

Takeshi Sasagase, Takeshi Arai, Masayasu Kuwahara, Hiroaki Ozaki, and Hiroaki Sawai
Interaction with and cleavage of DNA by novel phenanthroline polyamine derivative
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 193-194; doi:10.1093/nass/nrm097 [Abstract] [PDF] [Request Permissions]  

Tuomas Lönnberg, Yuta Suzuki, and Makoto Komiyama
Ce(IV)-Catalyzed Site-Selective DNA Hydrolysis Using Tris- and Tetrakismethylenephosphonate-Modified Oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 195-196; doi:10.1093/nass/nrm098 [Abstract] [PDF] [Request Permissions]  

Narumi Shigi, Kosuke Otani, and Makoto Komiyama
Gene manipulation of adenovirus vector by artificial restriction DNA cutter
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 197-198; doi:10.1093/nass/nrm099 [Abstract] [PDF] [Request Permissions]  

Yan Xu, Youhei Hirohata, and Makoto Komiyama
Sequence-specific cleavage of human telomere DNA by G-quadruplex formation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 199-200; doi:10.1093/nass/nrm100 [Abstract] [PDF] [Request Permissions]  

Merita Murtola and Roger Strömberg
Development of 2'-O-Methyloligoribonucleotide and Peptide Nucleic Acid Based Artificial Ribonucleases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 201-202; doi:10.1093/nass/nrm101 [Abstract] [PDF] [Request Permissions]  

Hiroshi Takayama, Satoshi Sakamoto, Masaya Kitamura, and Hideo Inoue
Development of Site-specific Artificial Ribonucleases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 203-204; doi:10.1093/nass/nrm102 [Abstract] [PDF] [Request Permissions]  

Keita Tanaka, Yoji Yamamoto, Akinori Kuzuya, and Makoto Komiyama
Photocontrol of site-selective RNA scission
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 205-206; doi:10.1093/nass/nrm103 [Abstract] [PDF] [Request Permissions]  

Shoji Moriyama, Yoshiya Ikawa, and Hiroyuki Furuta
Synthesis of a water soluble N-confused porphyrin and its interaction with nucleic acids
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 207-208; doi:10.1093/nass/nrm104 [Abstract] [PDF] [Request Permissions]  

Kenatarou Watanabe, Toyofusa Katou, Yasunori Ikezawa, Saki Yajima, Hirohito Shionoya, Takashi Akagi, and Keita Hamasaki
Nucleobase modified neamines, their synthesis and binding specificity for HIV TAR RNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 209-210; doi:10.1093/nass/nrm105 [Abstract] [PDF] [Request Permissions]  

Kazuo Negishi, Daijiro Sekine, Takumi Morimitsu, Tetsuya Suzuki, Yoji Okugawa, Asako Kawakami, Chie Otsuka, Hiroshi Oyama, and David Loakes
Oligonucleotide transformation for the study of mutagenic specificities of DNA lesions in yeast
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 211-212; doi:10.1093/nass/nrm106 [Abstract] [PDF] [Request Permissions]  

Toshiaki Nakano, Soh Morishita, Hiroaki Terato, Seung Pil Pack, Keisuke Makino, and Hiroshi Ide
Repair mechanism of DNA-protein cross-link damage in Escherichia coli
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 213-214; doi:10.1093/nass/nrm107 [Abstract] [PDF] [Request Permissions]  

Toshiya Okajima
The reactivity of compounds having cyclopropane ring as the reactive site of drugs with DNA bases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 215-216; doi:10.1093/nass/nrm108 [Abstract] [PDF] [Request Permissions]  

Yosuke Taniguchi and Eric T. Kool
Syntheses and properties of low-polarity shape mimics of 8oxopurines
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 217-218; doi:10.1093/nass/nrm109 [Abstract] [PDF] [Request Permissions]  

Hisatsugu Yamada, Kazuhito Tanabe, and Sei-ichi Nishimoto
Site-selective strand cleavage at methylated cytosine: regional effect of naphthoquinone chromophore on the one-electron photooxidation of 5-methylcytosine and positive charge transfer in DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 219-220; doi:10.1093/nass/nrm110 [Abstract] [PDF] [Request Permissions]  

Hiroaki Terato, Ruri Tanaka, Yusuke Nakaarai, Ryoichi Hirayama, Yoshiya Furusawa, and Hiroshi Ide
Analysis of complex DNA lesions generated by heavy ion beams
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 221-222; doi:10.1093/nass/nrm111 [Abstract] [PDF] [Request Permissions]  

Emi Kuraseko, Kazuhito Tanabe, and Sei-ichi Nishimoto
Radiation-induced one-electron reduction of oligodeoxynucleotides possessing disulfide bond
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 223-224; doi:10.1093/nass/nrm112 [Abstract] [PDF] [Request Permissions]  

Toru Matsui, Yasuteru Shigeta, and Kimihiko Hirao
Metal-assisted proton transfer reaction in base pairs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 225-226; doi:10.1093/nass/nrm113 [Abstract] [PDF] [Request Permissions]  

Mitsuru Nonogawa, Piyanart Sommani, Toshiyuki Arai, Nobuyuki Endo, Seung Pil Pack, Tsutomu Kodaki, Yashige Kotake, and Keisuke Makino
Chemical natures of 6-formylpterin nucleoside analogs
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 227-228; doi:10.1093/nass/nrm114 [Abstract] [PDF] [Request Permissions]  

Zhouen Zhang, Ken-ichi Haruna, Takeo Ito, Hiroshi Hatta, and Sei-ichi Nishimoto
Development of Novel Oxygen-Independent Photosensitizers
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 229-230; doi:10.1093/nass/nrm115 [Abstract] [PDF] [Request Permissions]  

Masayuki Ogino and Kenzo Fujimoto
Photochemical Synthesis of R-shaped DNA via 5-Cyanovinyldeoxyuridine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 231-232; doi:10.1093/nass/nrm116 [Abstract] [PDF] [Request Permissions]  

Takashi Matsumura, Yoshinaga Yoshimura, and Kenzo Fujimoto
Photochemical transition of 5-methylcytosine to thymine by DNA photoligation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 233-234; doi:10.1093/nass/nrm117 [Abstract] [PDF] [Request Permissions]  

Shinzi Ogasawara, Takehiro Ammi, and Kenzo Fujimoto
Parallel processable light-driven DNA logic gate
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 235-236; doi:10.1093/nass/nrm118 [Abstract] [PDF] [Request Permissions]  

Pelin Arslan, Toshihiro Ihara, Motoko Mukae, and Akinori Jyo
Effect of local structural disruption on the photochemical ligation between anthracene-modified DNA conjugates
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 237-238; doi:10.1093/nass/nrm119 [Abstract] [PDF] [Request Permissions]  

Tomoko Mashimo and Hiroshi Sugiyama
Folding pathways of human telomeric hybrid G-quadruplex structure
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 239-240; doi:10.1093/nass/nrm120 [Abstract] [PDF] [Request Permissions]  

Yan Xu and Makoto Komiyama
The structural studies of human telomeric DNA using AFM
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 241-242; doi:10.1093/nass/nrm121 [Abstract] [PDF] [Request Permissions]  

Yan Xu, Hiroyuki Sato, Ken-ichi Shinohara, Makoto Komiyama, and Hiroshi Sugiyama
T-loop formation by human telomeric G-quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 243-244; doi:10.1093/nass/nrm122 [Abstract] [PDF] [Request Permissions]  

Noriko Sakuma, Makie Ozawa, Shin Kawano, Hajime Mita, Hikaru Hemmi, and Yasuhiko Yamamoto
Thermodynamics of dimerization of parallel quadruplex DNAs through the end-to-end stacking of 3'-terminal G-quartets
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 245-246; doi:10.1093/nass/nrm123 [Abstract] [PDF] [Request Permissions]  

Yoshinobu Ishikawa, Eiki Higashi, and Hiroshi Morioka
Molecular Docking of Porphyrins with Cationic Limbs on Intramolecular G-quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 247-248; doi:10.1093/nass/nrm124 [Abstract] [PDF] [Request Permissions]  

Hidetaka Torigoe and Kaoru Kaneda
Unfolding of tetraplex structure of mouse telomeric DNA by the interaction with mouse telomeric DNA binding protein Pot1
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 249-250; doi:10.1093/nass/nrm125 [Abstract] [PDF] [Request Permissions]  

Hisae Karimata, Daisuke Miyoshi, Takeshi Fujimoto, Kazuya Koumoto, Zhong-Ming Wang, and Naoki Sugimoto
Conformational switch of a functional nanowire based on the DNA G-quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 251-252; doi:10.1093/nass/nrm126 [Abstract] [PDF] [Request Permissions]  

Xiaohong Liu, Jingping Liu, Tsukasa Ogawara, Yuichi Kurashina, Ryosuke Yashi, Mineo Saneyoshi, and Toyofumi Yamaguchi
Influence of nucleoside analogue treatment on telomere length and TRF2 amount in human HL60 cells
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 253-254; doi:10.1093/nass/nrm127 [Abstract] [PDF] [Request Permissions]  

Eriko Aoki, Yosuke Taniguchi, and Shigeki Sasaki
Effective strand invasion ODN incorporating a new bicyclic nucleoside analogue(WNA)
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 255-256; doi:10.1093/nass/nrm128 [Abstract] [PDF] [Request Permissions]  

Taisuke Hirano, Kenji Kuroda, Masanori Kataoka, and Yoshihiro Hayakawa
Binding affinity of a peptide–nucleic acid containing pyrimido[4,5-d]pyrimidine-2,4,5,7-(1H,3H,6H,8H)-tetraone as a nucleobase for oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 257-258; doi:10.1093/nass/nrm129 [Abstract] [PDF] [Request Permissions]  

Hirotake Harada, Sho Funayama, Yoshiaki Shoji, and Takeshi Wada
Solid-phase synthesis and properties of chiral peptide nucleic acids bearing cationic side chains
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 259-260; doi:10.1093/nass/nrm130 [Abstract] [PDF] [Request Permissions]  

Akira Noguchi and Hiroyuki Asan
Design of peptide nucleic acid by introduction of carbohydrate on lysine linker.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 261-262; doi:10.1093/nass/nrm131 [Abstract] [PDF] [Request Permissions]  

Etsuko Kawashima, Yasuhiro Nakanishi, Yusuke Terui, Hideyuki Tomitori, Keiko Kashiwagi, Yusuke Ohba, and Kazuo Kamaike
Synthesis and evaluation of 2-pyrrolepolyamide-2’-deoxyguanosine 5’-phosphate
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 263-264; doi:10.1093/nass/nrm132 [Abstract] [PDF] [Request Permissions]  

Shunta Sasaki, Masafumi Minoshima, Jun Fujimoto, Ken-ichi Shinohara, Toshikazu Bando, and Hiroshi Sugiyama
Sequence-specific alkylation by a tandem motif of pyrrole-imidazole CBI conjugate
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 265-266; doi:10.1093/nass/nrm133 [Abstract] [PDF] [Request Permissions]  

Tomoko Fujino, Guillot Marine, and Eiichi Nakamura
Synthesis of an Artificial Oligonucleotide an Efficient Cycloaddition Reaction
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 267-268; doi:10.1093/nass/nrm134 [Abstract] [PDF] [Request Permissions]  

Toru Sugiyama, Yasutada Imamura, Masaaki Kurihara, and Atsushi Kittaka
Recognition of longer duplex DNA by cooperative strand invasion
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 269-270; doi:10.1093/nass/nrm135 [Abstract] [PDF] [Request Permissions]  

Yoshitaka Miyajima, Yoji Yamamoto, and Makoto Komiyama
Promotion of PNA double-duplex invasion by glutaric dialdehyde
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 271-272; doi:10.1093/nass/nrm136 [Abstract] [PDF] [Request Permissions]  

Kazimierz Grzeskowiak
Base and chain sense in d(CGCGCG)-BP and d(TATATATATATA). Analysis of CD measurements and x-ray crystal data.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 273-274; doi:10.1093/nass/nrm137 [Abstract] [PDF] [Request Permissions]  

Mitsunobu Nakamura, Kazushige Yamana, Yukinori Simomura, and Yukinori Ohtoshi
Structure and excimer fluorescence of helical-pyrene-arrays assembled on duplex RNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 275-276; doi:10.1093/nass/nrm138 [Abstract] [PDF] [Request Permissions]  

Taiga Fujii, Hiromu Kashida, and Hiroyuki Asanuma
Preparation of "comb-type" hetero aggregates by DNA-dye conjugation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 277-278; doi:10.1093/nass/nrm139 [Abstract] [PDF] [Request Permissions]  

Hiromu Kashida, Tomohiko Takatsu, and Hiroyuki Asanuma
Development of high-sensitive DNA probe by using perylene
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 279-280; doi:10.1093/nass/nrm140 [Abstract] [PDF] [Request Permissions]  

Atsushi Narita, Shinsuke Sando, and Yasuhiro Aoyama
Sensing of nucleic acid sequences using unmodifiednucleic acid as a probe
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 281-282; doi:10.1093/nass/nrm141 [Abstract] [PDF] [Request Permissions]  

Yusuke Takaku, Masahiro Mizuta, Akihiro Ohkubo, Mitsuo Sekine, and Kohji Seio
Recognition of target chain-length by use of oligonucleotides having bulky substituents at the terminal bases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 283-284; doi:10.1093/nass/nrm142 [Abstract] [PDF] [Request Permissions]  

Kazunori Ikebukuro, Takenori Kumagai, Hiroaki Motoki, Yuko Osawa, Takafumi Matuo, Michio Horiuchi, and Koji Sode
Specific detection of PCR product from Legionella pneumophila strainPhiladelphia1 using zinc finger protein Sp2
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 285-286; doi:10.1093/nass/nrm143 [Abstract] [PDF] [Request Permissions]  

Motoko Mukae, Miyuki Tabara, Pelin Arslan, Toshihiro Ihara, and Akinori Jyo
Detection of one base mismatch using photochemical ligation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 287-288; doi:10.1093/nass/nrm144 [Abstract] [PDF] [Request Permissions]  

Tsuyoshi Suzuki, Keiichi Suzuki, Yohei Tashiro, Kyoichi Saito, and Daisuke Umeno
Probing the mutation spectrum in E. coli
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 289-290; doi:10.1093/nass/nrm145 [Abstract] [PDF] [Request Permissions]  

Takeshi Kubota, Shuji Ikeda, and Akimitsu Okamoto
RNA analysis with a novel fluorescent oligonucleotide
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 291-292; doi:10.1093/nass/nrm146 [Abstract] [PDF] [Request Permissions]  

Yoshihito Ueno, Akihiro Kawamura, Takumi Kato, and Yukio Kitade
Synthesis and properties of a novel molecular beacon containing a benzene-phosphate backbone at a stem moiety
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 293-294; doi:10.1093/nass/nrm147 [Abstract] [PDF] [Request Permissions]  

Kotaro Morita, Yusuke Sato, Takehiro Seino, Seiichi Nishizawa, and Norio Teramae
Electrochemical and fluorescence detection of cytosine-related SNPs using a ferrocenyl naphthyridine derivative
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 295-296; doi:10.1093/nass/nrm148 [Abstract] [PDF] [Request Permissions]  

Hiroyuki Satake, Seiichi Nishizawa, and Norio Teramae
Fluorescence emission detection of single-nucleotide polymorphisms by a naphthyridine-benzofurazan conjugate
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 297-298; doi:10.1093/nass/nrm149 [Abstract] [PDF] [Request Permissions]  

Akiko Nomura, Kazuki Tainaka, and Akimitsu Okamoto
Selective oxidation of methylcytosine in single base pair mismatches by osmium complex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 299-300; doi:10.1093/nass/nrm150 [Abstract] [PDF] [Request Permissions]  

Shuji Ikeda and Akimitsu Okamoto
Photochemical properties of novel fluorescent probes for detection of DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 301-302; doi:10.1093/nass/nrm151 [Abstract] [PDF] [Request Permissions]  

Keitaro Yoshimoto, Hiroshi Atsumi, Shingo Saito, Moriya Okuma, Mizuo Maeda, and Yukio Nagasaki
Fluorescence-based affinity labeling of nucleobase by hydrogenbond forming metal complex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 303-304; doi:10.1093/nass/nrm152 [Abstract] [PDF] [Request Permissions]  

Tohru Takarada, Emi Imaizumi, Katsuhito Kino, Keitaro Yoshimoto, Shinzi Ogasawara, Naoki Kanayama, and Mizuo Maeda
Detection of base pairing of an oxidatively damaged guanine using colloidal stability change of DNA-linked polymer micelles
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 305-306; doi:10.1093/nass/nrm153 [Abstract] [PDF] [Request Permissions]  

Kazutoshi Yoshitake, Shoko Waki, and Hiroshi Ueda
Dimerization-based homogeneous fluorosensor proteins for the detection of specific dsDNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 307-308; doi:10.1093/nass/nrm154 [Abstract] [PDF] [Request Permissions]  

Akio Kobori, Takashi Mori, Asako Yamayoshi, and Akira Murakami
Synthesis of naphthyridine-conjugated DNA probes and their application to SNPs typing
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 309-310; doi:10.1093/nass/nrm155 [Abstract] [PDF] [Request Permissions]  

Arvind Misra, Pradeep Kumar, and K. C. Gupta
Design and Synthesis of Hairpin Probe for Specific Mis-match Discrimination
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 311-312; doi:10.1093/nass/nrm156 [Abstract] [PDF] [Request Permissions]  

Yusuke Sato, Takehiro Seino, Seiichi Nishizawa, and Norio Teramae
Strong binding of naphthyridine derivatives to cytosine in an AP site-containing DNA duplex and their application to fluorescence detection of single nucleotide polymorphisms
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 313-314; doi:10.1093/nass/nrm157 [Abstract] [PDF] [Request Permissions]  

Sayaka Ono, Zhichun Li, Yohei Koga, Akira Tsujimoto, Osamu Nakagawa, and Shigeki Sasaki
Development of a Specific Fluorescent Probe for 8-Oxoguanosine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 315-316; doi:10.1093/nass/nrm158 [Abstract] [PDF] [Request Permissions]  

Mitsunobu Nakamura, Masayuki Ueda, Sayuri Watanabe, Satoshi Kumamoto, and Kazushige Yamana
Electrochemical properties of anthraquinone-capped DNA-hairpins immobilized on gold surface
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 317-318; doi:10.1093/nass/nrm159 [Abstract] [PDF] [Request Permissions]  

Kenji Maie, Mitsunobu Nakamura, and Kazushige Yamana
Photocurrent responses from pyrene-modified RNA duplexes on gold surface
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 319-320; doi:10.1093/nass/nrm160 [Abstract] [PDF] [Request Permissions]  

Mariko Watanabe, Jyun Yoshizumi, Satoshi Kumamoto, Mitsunobu Nakamura, Atsushi Maruyama, and Kazushige Yamana
Electrochemical biosensors based on DNA strand exchange
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 321-322; doi:10.1093/nass/nrm161 [Abstract] [PDF] [Request Permissions]  

Masanori Kanazawa, Shinobu Sato, Keiichi Ohtsuka, and Shigeori Takenaka
Electrochemical RNase detection using ferrocenylnaphthalene diimide
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 323-324; doi:10.1093/nass/nrm162 [Abstract] [PDF] [Request Permissions]  

Takehiro Ami and Kenzo Fujimoto
Effective two-color SNP typing based on photoligation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 325-326; doi:10.1093/nass/nrm163 [Abstract] [PDF] [Request Permissions]  

Nagendra Kumar Kamisetty, Seung Pil Pack, Mitsuru Nonogawa, Kamakshaiah Charyulu Devarayapalli, Yasuko Yoshida, Kazunari Yamada, Tsutomu Kodaki, and Keisuke Makino
Development of stable DNA microarray platforms suitable for quantitative analysis
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 327-328; doi:10.1093/nass/nrm164 [Abstract] [PDF] [Request Permissions]  

Arvind Misra, Pratibha Dwivedi, and Mohammad Shahid
Construction of DNA Microarray on Glass Surface using Efficient Heterobifunctional reagent
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 329-330; doi:10.1093/nass/nrm165 [Abstract] [PDF] [Request Permissions]  

Akinori Kuzuya and Makoto Komiyama
A Robust DNA Framework for Single Molecule Observation with Atomic Force Microscope
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 331-332; doi:10.1093/nass/nrm166 [Abstract] [PDF] [Request Permissions]  

Shoichiro Asayama, Takashi Sekine, Hiroyoshi Kawakami, and Shoji Nagaoka
Synthesis of Aminated Poly(1-vinylimidazole) for a New pH-Sensitive DNA Carrier
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 333-334; doi:10.1093/nass/nrm167 [Abstract] [PDF] [Request Permissions]  

Shizuto Yamakoshi, Yasuhiro Sakai, Yuya Shinohara, Yoshiyuki Amemiya, Naoki Kanayama, Tohru Takarada, Mizuo Maeda, and Kohzo Ito
SAXS measurement of aggregate of DNA modified gold nanoparticles
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 335-336; doi:10.1093/nass/nrm168 [Abstract] [PDF] [Request Permissions]  

Ayumi Kimura, Tohru Takarada, Naoki Kanayama, Hideaki Shibata, and Mizuo Maeda
Point Mutation Assay by Affinity Capillary Electrophoresis Using Poly(ethylene glycol)-oligodeoxyribonucleotide block copolymers
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 337-338; doi:10.1093/nass/nrm169 [Abstract] [PDF] [Request Permissions]  

Naohiko Shimada, Kentaro Muraki, Taro Anai, Arihiro Kano, and Atsushi Maruyama
Novel analysis for single nucleotide polymorphism using cationic comb-type copolymers
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 339-340; doi:10.1093/nass/nrm170 [Abstract] [PDF] [Request Permissions]  

Mikio Kato, Takeshi Haku, Takeshi Yamauchi, Shigeru Sugiyama, Kuniaki Nagayama, and Nobuyoshi Shimizu
Structural characterization of supercoiled DNA containing a minisatellite repeat that has polypurine/polypyrimidine stretch
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 341-342; doi:10.1093/nass/nrm171 [Abstract] [PDF] [Request Permissions]  

Tsuyoshi Kimura, Kana Horiuchi, Kimio Kurita, Tsutomu Ono, Hidekazu Yoshizawa, Toshiya Fujisato, and Akio Kishida
Characteristics of compacted plasmid DNA by high pressurization
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 343-344; doi:10.1093/nass/nrm172 [Abstract] [PDF] [Request Permissions]  

Tomoaki Mori, Jun Sasaki, Yasuhiro Aoyama, and Takashi Sera
Modulation of endogenous VEGF-A expression by artificial transcription factors
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 345-346; doi:10.1093/nass/nrm173 [Abstract] [PDF] [Request Permissions]  

Shourong Wu, Saomi Murai, Kazunori Kataoka, and Makoto Miyagishi
Cooperative regulation of p73 promoter by Yin Yang 1 and E2F1
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 347-348; doi:10.1093/nass/nrm174 [Abstract] [PDF] [Request Permissions]  

Xingguo Liang, Ryuji Wakuda, Yuichiro Tsuda, Hidenori Nishioka, and Hiroyuki Asanuma
Effective photoregulation of gene expression by photo responsive T7 promoter
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 349-350; doi:10.1093/nass/nrm175 [Abstract] [PDF] [Request Permissions]  

Xingguo Liang, Tomohiro Kato, and Hiroyuki Asanuma
Unexpected efficient abinitioDNA synthesis at low temperature by using thermophilic DNA polymerase
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 351-352; doi:10.1093/nass/nrm176 [Abstract] [PDF] [Request Permissions]  

Yuko Kondo, Hiroshi Abe, Hiroshi Jinmei, Naoko Abe, Kyoko Aikawa, Isamu Matsumoto, and Yoshihiro Ito
Multiple chemical ligation under thermal cycle
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 353-354; doi:10.1093/nass/nrm177 [Abstract] [PDF] [Request Permissions]  

Takaaki Ogino, Naonori Inoue, Kousuke Sato, and Akira Matsuda
Enzymatic and Chemical Synthesis of Isodeoxynucleic acid (INA) and its properties
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 355-356; doi:10.1093/nass/nrm178 [Abstract] [PDF] [Request Permissions]  

Shuhei Imoto, Md. Monsur Ali, Yingfu Li, Shigeki Sasaki, and Fumi Nagatsugi
Enzymatic Incorporation of 2-Amino-6-Vinylpurine Derivative
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 357-358; doi:10.1093/nass/nrm179 [Abstract] [PDF] [Request Permissions]  

Yuki Muneyoshi, Keisuke Matsumoto, Chie Tomikawa, Takashi Toyooka, Anna Ochi, Takashi Masaoka, Yaeta Endo, and Hiroyuki Hori
Hetero subunit interaction and RNA recognition of yeast tRNA (m7G46) methyltransferase synthesized in a wheat germ cell-free translation system
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 359-360; doi:10.1093/nass/nrm180 [Abstract] [PDF] [Request Permissions]  

Takashi Kawakami, Hiroshi Murakami, and Hiroaki Suga
Exploration of incorporation of N{alpha}-methylated amino acids into peptides by sense-suppression method
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 361-362; doi:10.1093/nass/nrm181 [Abstract] [PDF] [Request Permissions]  

Takayoshi Watanabe, Yoichi Miyata, Ryoji Abe, Norihito Muranaka, and Takahiro Hohsaka
N-terminal specific fluorescence labeling of proteins through fourbase codon-mediated incorporation of fluorescent hydroxy acid
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 363-364; doi:10.1093/nass/nrm182 [Abstract] [PDF] [Request Permissions]  

Mingzhe Liu, Hiroshi Jinmei, Koji Fukuzono, Hiroshi Abe, and Yoshihiro Ito
Intermolecular transfer of aminoacylated adenosine towards chemical aminoacylation of tRNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 365-366; doi:10.1093/nass/nrm183 [Abstract] [PDF] [Request Permissions]  

Wataru Tsuchiya, Manami Kimura, and Tsunemi Hasegawa
Determination of phenylalanine tRNA recognition sites by phenylalanyl-tRNA synthetase from hyperthermophilic archaeon, Aeropyrum pernix K1
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 367-368; doi:10.1093/nass/nrm184 [Abstract] [PDF] [Request Permissions]  

Kazuma Takada, Chie Takemoto, Masahito Kawazoe, Mikako Shirouzu, Shigeyuki Yokoyama, Akira Muto, and Hyouta Himeno
ThermusthermophilustmRNA andtranstranslation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 369-370; doi:10.1093/nass/nrm185 [Abstract] [PDF] [Request Permissions]  

Terumichi Tanaka and Yo Kikuchi
Mutational analysis on the S-domain of bacterial ribonuclease P ribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 371-372; doi:10.1093/nass/nrm186 [Abstract] [PDF] [Request Permissions]  

Anna Ochi and Hiroyuki Hori
Hydroxyl radical probing of tRNA (Gm18) methyltransferase [TrmH]-AdoMet-artificial tRNA ternary complex
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 373-374; doi:10.1093/nass/nrm187 [Abstract] [PDF] [Request Permissions]  

Takatsugu Kimura, Kuniaki Takagi, Hanawa-Suetsugu Kyoko, Liliya Kalachnyuk, Akira Muto, and Hyouta Himeno
Interaction between RsgA and the ribosome
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 375-376; doi:10.1093/nass/nrm188 [Abstract] [PDF] [Request Permissions]  

Nicolas Soler, Dominique Fourmy, and Satoko Yoshizawa
Molecular switch in tandem winged-helix motifs of elongation factor SelB
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 377-378; doi:10.1093/nass/nrm189 [Abstract] [PDF] [Request Permissions]  

Taek Jin Kang and Hiroaki Suga
In vitro selection of a 5'-purine nucleotide transferase ribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 379-380; doi:10.1093/nass/nrm190 [Abstract] [PDF] [Request Permissions]  

Swetansu B Pattnaik and Hiroaki Suga
Reengineering aninvitroevolved ribozyme.
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 381-382; doi:10.1093/nass/nrm191 [Abstract] [PDF] [Request Permissions]  

Takeshi Yokoyama and Tsutomu Suzuki
Ligand-induced translation by the allosteric ribosome bearing an aptamer-fused rRNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 383-384; doi:10.1093/nass/nrm192 [Abstract] [PDF] [Request Permissions]  

Mayumi Amano and Institute for Protein Research)
Magnesium binding sites of the active conformation pf Hammerheadribozyme
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 385-386; doi:10.1093/nass/nrm193 [Abstract] [PDF] [Request Permissions]  

Norimasa Kashiwagi, Hiroyuki Furuta, and Yoshiya Ikawa
Design and analysis of a structural RNA that acts as a template for peptide ligation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 387-388; doi:10.1093/nass/nrm194 [Abstract] [PDF] [Request Permissions]  

Atsushi Ogawa and Mizuo Maeda
Development of a New-type Riboswitch Using an Aptazyme and an anti-RBS Sequence
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 389-390; doi:10.1093/nass/nrm195 [Abstract] [PDF] [Request Permissions]  

So Umekage and Yo Kikuchi
Production of circular streptavidin RNA aptamer in vivo
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 391-392; doi:10.1093/nass/nrm196 [Abstract] [PDF] [Request Permissions]  

Keisuke Konno, Satoshi Nishikawa, Tsunemi Hasegawa, and Kotaro Fukuda
Isolation of RNA aptamers specific for the HCV minus-IRES domain I
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 393-394; doi:10.1093/nass/nrm197 [Abstract] [PDF] [Request Permissions]  

Shoji P. Ohuchi and Yoshikazu Nakamura
Slight sequence modifications unexpectedly alter the metal-dependency of a kissing-loop interaction
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 395-396; doi:10.1093/nass/nrm198 [Abstract] [PDF] [Request Permissions]  

Fumiko Nishikawa, Kazuyoshi Murakami, Ken Noda, Takashi Yokoyama, and Satoshi Nishikawa
Detection of structural changes of RNA aptamer containing GGA repeats under the ionic condition using the microchip electrophoresis
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 397-398; doi:10.1093/nass/nrm199 [Abstract] [PDF] [Request Permissions]  

Kazunori Ikebukuro, Hijiri Hasegawa, and Koji Sode
Selection and characterization of DNA aptamers against VEGF165 with aptamer blotting method and its application
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 399-400; doi:10.1093/nass/nrm200 [Abstract] [PDF] [Request Permissions]  

Kazunori Ikebukuro, Yo Morita, Wataru Yoshida, and Koji Sode
Construction of target molecule sensing system using aptameric enzyme subunit based on PQQGDH activity
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 401-402; doi:10.1093/nass/nrm201 [Abstract] [PDF] [Request Permissions]  

Kazunori Ikebukuro, Madoka Takase, and Koji Sode
Selection of DNA aptamers that inhibit enzymatic activity of PQQGDH and its application
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 403-404; doi:10.1093/nass/nrm202 [Abstract] [PDF] [Request Permissions]  

Tomoya Watanabe, Takashi Tokisue, Tadayuki Tsujita, Misako Matsumoto, Tsukasa Seya, Satoshi Nishikawa, Tsunemi Hasegawa, and Kotaro Fukuda
N-terminal Binding Site in The Human Toll-like Receptor 3 Ectodomain
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 405-406; doi:10.1093/nass/nrm203 [Abstract] [PDF] [Request Permissions]  

Takanori Kubo, Zhivko Zhelev, Rumiana Bakalova, and Hideki Ohba
Enhancement of gene silencing potency and nuclease stability by chemically modified duplex RNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 407-408; doi:10.1093/nass/nrm204 [Abstract] [PDF] [Request Permissions]  

Kousei Noguchi, Yoshio Ishitu, Naoko Miyano-Kurosaki, and Hiroshi Takaku
Expression of shRNA using intron splicing
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 409-410; doi:10.1093/nass/nrm205 [Abstract] [PDF] [Request Permissions]  

Keijiro Kato, Yuichiro Habu, and Hiroshi Takaku
Non-sequence specific RNA inhibition of HIV-1 replication
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 411-412; doi:10.1093/nass/nrm206 [Abstract] [PDF] [Request Permissions]  

Ai Kuwahara, Masashi Arita, Masahiko Sisido, and Takashi Ohtsuki
Delivery of dsRNA with lactic acid bacteria for RNA interference
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 413-414; doi:10.1093/nass/nrm207 [Abstract] [PDF] [Request Permissions]  

Kimihiro Hino, Taro Fukao, and Mamoru Watanabe
Regulatory Interaction of HNF1{alpha} to microRNA194 Gene During Intestinal Epithelial Cell Differentiation
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 415-416; doi:10.1093/nass/nrm208 [Abstract] [PDF] [Request Permissions]  

Yohei Kirino and Zissimos Mourelatos
2'-O-methyl modification in mouse piRNAs and its methylase
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 417-418; doi:10.1093/nass/nrm209 [Abstract] [PDF] [Request Permissions]  

Yoshihisa Ohsako, Kota Tsutsumi, Xianglan Li, Yasuyuki Kurihara, and Seiichi Uesugi
Studies on RNA-protein interactions and enzyme activity by mutational analysis of telomerase
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 419-420; doi:10.1093/nass/nrm210 [Abstract] [PDF] [Request Permissions]  

Masatora Fukuda, Shun Nakano, and Takashi Morii
Controlling a substrate-binding geometry of ribonucleopeptide receptor
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 421-422; doi:10.1093/nass/nrm211 [Abstract] [PDF] [Request Permissions]  

Tetsuya Hasegawa, Hironori Hayashi, and Takashi Morii
Construction of ribonucleopeptide-based fluorescent sensors for biologically active amines
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 423-424; doi:10.1093/nass/nrm212 [Abstract] [PDF] [Request Permissions]  

Maki Sugaya, Kazuo Harada, and Akira Katoh
A facile method for the detection of RNA-polypeptide interactions by MALDI-TOF mass spectrometry
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 425-426; doi:10.1093/nass/nrm213 [Abstract] [PDF] [Request Permissions]  

Takashi Mino, Tomoaki Mori, Yasuhiro Aoyama, and Takashi Sera
Development of protein-based antiviral drugs for human papillomaviruses
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 427-428; doi:10.1093/nass/nrm214 [Abstract] [PDF] [Request Permissions]  

Kosuke Takenaka, Yoshihiro Koshino-Kimura, Yasuhiro Aoyama, and Takashi Sera
Inhibition of tomato yellow leaf curl virus replication by artificial zinc-finger proteins
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 429-430; doi:10.1093/nass/nrm215 [Abstract] [PDF] [Request Permissions]  

Mariko Hashimoto, Sadao Hikishima, Lucyna Magnowska, Angieszka Bzowska, and Tsutomu Yokomatsu
Synthesis and evaluation of 9-deazaguanine derivatives as multi-substrate analogue inhibitors of PNP
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 431-432; doi:10.1093/nass/nrm216 [Abstract] [PDF] [Request Permissions]  

Akira Sato, Eriko Miyazaki, Akito Satake, Akiko Hiramoto, Osamu Hiraoka, Tsuyoshi Miyake, Hye-Sook Kim, and Yusuke Wataya
Proteome and transcriptome analysis of cell death induced by 5-fluoro-2'-deoxyuridine
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 433-434; doi:10.1093/nass/nrm217 [Abstract] [PDF] [Request Permissions]  

Tomoharu Naito, Tatsushi Yokogawa, Hye-Sook Kim, Akira Matsuda, Takuma Sasaki, Masakazu Fukushima, Yukio Kitade, and Yusuke Wataya
A novel apoptotic pathway of 3’-Ethynylcytidine(ECyd) involving the inhibition of RNA synthesis – The possibility of RNase L activated pathway as a target of ECyd –
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 435-436; doi:10.1093/nass/nrm218 [Abstract] [PDF] [Request Permissions]  

Ikuko Tsukamoto, Ryoji Konishi, Yasuo Kubota, Masaaki Tokuda, Norikazu Sakakibara, and Tokumi Maruyama
Anti-angiogenic activities of nucleosides and nucleotides and their structure-activity relationship
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 437-438; doi:10.1093/nass/nrm219 [Abstract] [PDF] [Request Permissions]  

Masahiro Ikejiri, Takayuki Ohshima, Keizo Kato, Masaaki Toyama, Takayuki Murata, Kunitada Shimotohno, and Tokumi Maruyama
Suppression of subgenomic hepatitis C virus replication by 5'-O-masked analogues of 6-chloropurine-2'-deoxyriboside
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 439-440; doi:10.1093/nass/nrm220 [Abstract] [PDF] [Request Permissions]  

Keisuke Tachibana, Tatsuya Katayama, Chihiro Ueda, Mikako Sumitomo, Masayuki Tagami, Kenji Ishimoto, Daisuke Yamasaki, Toshiya Tanaka, Takao Hamakubo, Juro Sakai, Tatsuhiko Kodama, Satoshi Obika, Takeshi Imanishi, and Takefumi Doi
Antisense activity of 2',4'-BNA targeted to PPAR gamma in THP-1 and HCT116 cells
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 441-442; doi:10.1093/nass/nrm221 [Abstract] [PDF] [Request Permissions]  

Maiko Higuchi, Asako Yamayoshi, Akio Kobori, and Akira Murakami
Selective regulation of mutant K-ras mRNA expression by photo-cross-linking antisense oligonucleotide
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 443-444; doi:10.1093/nass/nrm222 [Abstract] [PDF] [Request Permissions]  

Takashi Toyooka and Hiroyuki Hori
Differences in substrate selectivities of the SPOUT superfamily of methyltransferases
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 445-446; doi:10.1093/nass/nrm223 [Abstract] [PDF] [Request Permissions]  

Yasumitsu Sakamoto, Nobutada Tanaka, Tomomi Ichimiya, Tadashi Kurihara, and Kazuo T. Nakamura
Structural comparison analysis of 2H phosphodiesterase family proteins
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 447-448; doi:10.1093/nass/nrm224 [Abstract] [PDF] [Request Permissions]  

Takeshi Nakamura, Yasutomo Ito, Masahiko Mochizuki, Yoshihito Ueno, and Yukio Kitade
Synthesis of 2',5'-oligoadenylate analogs possessing a linker moiety in the place of the second adenosine and their ability to activate human RNase L
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 449-450; doi:10.1093/nass/nrm225 [Abstract] [PDF] [Request Permissions]  

Akihiro Doi, Seung Pil Pack, Mitsuru Nonogawa, Tsutomu Kodaki, and Keisuke Makino
Comparison of enzymatic recognition of DNA-duplexes containing NO-induced lesions by DNA-relevant enzymes
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 451-452; doi:10.1093/nass/nrm226 [Abstract] [PDF] [Request Permissions]  

Hidehito Urata, Chihiro Tamaki, Miki Matsuno, Shun-ichi Wada, and Masao Akagi
Monitoring of Eco RI-catalyzed cleavage reaction of fluorescent-labeled heterochiral DNA
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 453-454; doi:10.1093/nass/nrm227 [Abstract] [PDF] [Request Permissions]  

Aya Tujiyama, Mika Takematsu, and Kazuo Yoshida
Relationship between asymmetrical gene distribution on DNA strands and phylogeny in cytoplasmic organelles and elements (1)
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 455-456; doi:10.1093/nass/nrm228 [Abstract] [PDF] [Request Permissions]  

Taro Nishinaka, Yuko Doi, Reiko Hara, and Eiji Yashima
Elastic motion of RecA filaments and its role in recombination
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 457-458; doi:10.1093/nass/nrm229 [Abstract] [PDF] [Request Permissions]  

Naoya Koizumi, Yuya Isoda, Kiyoe Maeda, Sumiko Masuda, Gunter Fibriansah, Takashi Kumasaka, Rie Yatsunami, Toshiaki Fukui, and Satoshi Nakamura
Characterization of Nocardiopsis ß-1,3-glucanase with additional carbohydrate-binding domains
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 459-460; doi:10.1093/nass/nrm230 [Abstract] [PDF] [Request Permissions]  

Hirohito Umemoto, Ihsanawati, Mayuko Inami, Rie Yatsunami, Toshiaki Fukui, Takashi Kumasaka, Nobuo Tanaka, and Satoshi Nakamura
Contribution of salt bridges to alkaliphily of Bacillusalkaline xylanase
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 461-462; doi:10.1093/nass/nrm231 [Abstract] [PDF] [Request Permissions]  

Takeshi Machida, Eri Kato, Akiko Ishibashi, Naoto Ohashi, Ken-ichi Honjoh, and Takahisa Miyamoto
Molecular characterization of low-temperature-inducible NTR-C in Chlorella vulgaris
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 463-464; doi:10.1093/nass/nrm232 [Abstract] [PDF] [Request Permissions]  

Yoshinori Tsuchiya, Kazuki Morioka, Kazuo Yoshida, Junsuke Shirai, Takehiro Kokuho, and Shigeki Inumaru
Effect of N-terminal mutation of human lysozyme on enzymatic activity
NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 465-466; doi:10.1093/nass/nrm233 [Abstract] [PDF] [Request Permissions]  

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NUCLEIC ACIDS SYMP SER (OXF) 2007 51: 467-470; doi:10.1093/nass/nrm234 [PDF] [Request Permissions]  

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