Nucleic Acids Symposium Series

Articles

Get checked abstract Hisashi Shimada, Satoshi Kikuchi, Saori Okuda, Kazuhiro Haraguchi, and Hiromichi Tanaka

Reaction of the 4'-benzenesulfonyl derivatives of thymidine with organosilicon and organoaluminum reagents
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 1-2; doi:10.1093/nass/nrp001 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tomonobu Mutsumi, Kazuo Maruhashi, Yasunari Monguchi, and Hironao Sajiki

Alternative I-D exchange reaction on pyrimidine and purine nuclei mediated by tributyltin hydride using THF-d₈ as a deuterium source
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 3-4; doi:10.1093/nass/nrp002 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuhiro Muranaka, Satoshi Ichikawa, and Akira Matsuda

Rational design and synthesis of ansa-adenosines as potential antitumor agents
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 5-6; doi:10.1093/nass/nrp003 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Lak Shin Jeong, Dilip K. Tosh, and Won Jun Choi

Development of next generation 4'-selenonucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 7-8; doi:10.1093/nass/nrp004 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Naoki Iwamoto, Natsuhisa Oka, and Takeshi Wada

Stereocontrolled synthesis of oligodeoxyribonucleoside boranophosphates via stereodefined H-phosphonate intermediates
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 9-10; doi:10.1093/nass/nrp005 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Aiko Yahara, Masaru Nishida, Takeshi Baba, Tetsuya Kodama, Takeshi Imanishi, and Satoshi Obika

Synthesis and properties of a novel 2',4'-BNA bearing a urea bridged structure
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 11-12; doi:10.1093/nass/nrp006 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kohji Seio, Kazuya Miyazaki, Sayako Kurohagi, Yoshiaki Masaki, Hirosuke Tsunoda, Akihiro Ohkubo, and Mitsuo Sekine

Synthesis and properties of terminally modified oligonucleotides capable of short-RNA selective hybridization
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 13-14; doi:10.1093/nass/nrp007 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yukihide Tomari

Biochemical dissection of RISC assembly and function
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 15; doi:10.1093/nass/nrp008 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akira Ono, Kenji Iwamoto, Kumiko Sugiyama, and Itaru Okamoto

Metal ion binding of modified pyrimidine-base pairs in DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 17-18; doi:10.1093/nass/nrp009 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Toshihiro Ihara, Tatsuaki Ishii, and Akinori Jyo

Interaction of silver ion with CG.C⁺ base triplets in DNA triplex
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 19-20; doi:10.1093/nass/nrp010 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akihiro Ohkubo, Kenichi Miyata, Hirosuke Tsunoda, Kohji Seio, and Mitsuo Sekine

Synthesis and triplex formation of oligonucleotides containing 8-thioxodeoxyadenosine and 5-methyl-2-thiodeoxycytosine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 21-22; doi:10.1093/nass/nrp011 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hidetaka Torigoe, Yukako Miyakawa, Miyako Fukushi, Akira Ono, and Tetsuo Kozasa

Development of a novel device to trap heavy metal cations: Application of the specific interaction between heavy metal cation and mismatch DNA base pair
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 23-24; doi:10.1093/nass/nrp012 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Carlo M. Croce

Role of microRNAs in the pathogenesis of human cance
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 25; doi:10.1093/nass/nrp013 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshihito Ueno, Shinji Komatsuzaki, Keiji Takasu, Yoshiaki Kitamura, and Yukio Kitade

Synthesis and properties of oligodeoxynucleotides containing biaryl units
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 27-28; doi:10.1093/nass/nrp014 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hiromu Kashida, Tomohiko Takatsu, and Hiroyuki Asanuma

Efficient energy transfer from pyrene to perylene assembled inside DNA duplex
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 29-30; doi:10.1093/nass/nrp015 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tomohisa Moriguchi, Masayoshi Hattori, Tohru Sekiguchi, and Kazuo Shinozuka

Investigation of the mechanism of the fluorescent emission of the silylated pyrene modified DNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 31-32; doi:10.1093/nass/nrp016 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshiya Ikawa, Hiroyuki Furuta, Kohei Yamashita, and Norimasa Kashiwagi

Toward a reciprocal evolution system between RNA and peptides as an artificial model for the early RNP world
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 33-34; doi:10.1093/nass/nrp017 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akihiro Fujimoto, Yo Kikuchi, and Terumichi Tanaka

Substrate recognition of pre-tRNA by ribonuclease P --- subsite model of natural ribozyme originated from Escherichia coli
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 35-36; doi:10.1093/nass/nrp018 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masumi Taki, Hiroyuki Kuroiwa, and Masahiko Sisido

The NEXT-A (N-Terminal EXtension with Transferase and ARS) reaction
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 37-38; doi:10.1093/nass/nrp019 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Mahmoud Kandeel, Yoshiaki Kitamura, and Yukio Kitade

The exceptional properties of Plasmodium deoxyguanylate pathways as a potential area for metabolic and drug discovery studies
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 39-40; doi:10.1093/nass/nrp020 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Philippe Meyer, Christophe Caillat, Dimitri Topalis, Jan Balzarini, and Dominique Deville-Bonne

Structural basis for the specificity of thymidylate kinases from human pathogens: implications for nucleotide analogues activation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 41; doi:10.1093/nass/nrp021 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Chuan He

Chemical methods to study protein-nucleic acid interactions
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 43; doi:10.1093/nass/nrp022 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Naoshi Kojima, Toshie Takebayashi, Akiko Mikami, Eiko Ohtsuka, and Yasuo Komatsu

Development of novel chemical probes to detect abasic sites in DNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 45-46; doi:10.1093/nass/nrp023 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuka Yamazaki, Anatoly Zinchenko, and Shizuaki Murata

Assessment of the DNA damage using the fluorescence microscope
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 47-48; doi:10.1093/nass/nrp024 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akimitsu Okamoto, Shuji Ikeda, Takeshi Kubota, Mizue Yuki, and Hiroyuki Yanagisawa

Exciton-controlled fluorescence: Application to hybridization-sensitive fluorescent DNA probe
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 49-50; doi:10.1093/nass/nrp025 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Stephen Lory, Massimo Merighi, and Mamoru Hyodo

Multiple activities of c-di-GMP in Pseudomonas aeruginosa
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 51-52; doi:10.1093/nass/nrp026 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Asako Yamayoshi, Daiki Momokawa, Akio Kobori, and Akira Murakami

Development of peptide-oligonucleotide conjugates for regulation of small RNA function
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 53-54; doi:10.1093/nass/nrp027 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akihiro Nishio, Nobuya Sawa, Keiko Onodera, Seiji Sakamoto, Yasuyuki Araki, Ikuhiko Nakase, Shiroh Futaki, Yoshihisa Inoue, and Takehiko Wada

Studies on the effects of arginine residues introduced to peptide ribonucleic acids (PRNA) on the complex stability with RNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 55-56; doi:10.1093/nass/nrp028 [Abstract] [PDF] [Request Permissions]  

Get checked abstract A. Pathak, S. Patnaik, and K.C. Gupta

Polyethylenimine derived nanoparticles for efficient gene delivery
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 57-58; doi:10.1093/nass/nrp029 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Daisuke Miyoshi, Sanjukta Muhuri, Kenta Mimura, and Naoki Sugimoto

DNA junction structure stabilized by molecular crowding conditions
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 59-60; doi:10.1093/nass/nrp030 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Rui Moriyama, Naohiko Shimada, Arihiro Kano, and Atsushi Maruyama

Cationic comb-type copolymer as a nucleic acid chaperone for DNA quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 61-62; doi:10.1093/nass/nrp031 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yan Xu, Yuta Suzuki, Kuniyuki Kaminaga, and Makoto Komiyama

Molecular basis of human telomere DNA/RNA structure and its potential application
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 63-64; doi:10.1093/nass/nrp032 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hiroshi Abe, Naoko Abe, Miwako Uda, Satoshi Tsuneda, and Yoshihiro Ito

Synthetic nanocircular RNA for controlling of gene expression
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 65-66; doi:10.1093/nass/nrp033 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazumitsu Onizuka, Yosuke Taniguchi, Takamasa Nishioka, and Shigeki Sasaki

Site-specific modification of RNA by functionality-transfer ODN probes
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 67-68; doi:10.1093/nass/nrp034 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masafumi Minoshima, Toshikazu Bando, Ken-ichi Shinohara, and Hiroshi Sugiyama

Molecular design of sequence specific DNA alkylating agents
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 69-70; doi:10.1093/nass/nrp035 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Keith R. Fox, Antonia S. Cardew, Nuria Vergara, and Tom Brown

Stable DNA triple helix formation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 71; doi:10.1093/nass/nrp036 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Michiko Kimoto, Akira Sato, Rie Kawai, Shigeyuki Yokoyama, and Ichiro Hirao

Site-specific incorporation of functional components into RNA by transcription using unnatural base pair systems
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 73-74; doi:10.1093/nass/nrp037 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akinori Kuzuya, Keita Tanaka, Hitoshi Katada, and Makoto Komiyama

Restriction enzyme treatment/ligation independent cloning using caged primers for PCR
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 75-76; doi:10.1093/nass/nrp038 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kiyohiko Kawai and Tetsuro Majima

Kinetic studies of long-range hole transfer through DNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 77-78; doi:10.1093/nass/nrp039 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Miki Hirabayashi, Hiroaki Kojima, and Kazuhiro Oiwa

Effective algorithm to encrypt information based on self-assembly of DNA tiles
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 79-80; doi:10.1093/nass/nrp040 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masayuki Endo and Hiroshi Sugiyama

Three-dimensional DNA nanostructures constructed by folding of multiple rectangles
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 81-82; doi:10.1093/nass/nrp041 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Luc Jaeger

Defining the syntax for self-assembling RNA tertiary architectures
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 83-84; doi:10.1093/nass/nrp042 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Gary B. Schuster

One-electron oxidation of DNA: mechanism and consequences
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 85-86; doi:10.1093/nass/nrp043 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Ayako Furukawa, Takashi Nagata, Akimasa Matsugami, Yuichirou Habu, Ryuichi Sugiyama, Fumiaki Hayashi, Naohiro Kobayashi, Shigeyuki Yokoyama, Hiroshi Takaku, and Masato Katahira

Structure and real-time monitoring of the enzymatic reaction of APOBEC3G which is involved in anti-HIV activity
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 87-88; doi:10.1093/nass/nrp044 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kyoko Furuita, Shunpei Murata, JunGoo Jee, Satoshi Ichikawa, Akira Matsuda, and Chojiro Kojima

NMR studies of DNA recognition mechanism of HMGB1 protein
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 89-90; doi:10.1093/nass/nrp045 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Satoru Horiya, Mitsuru Inaba, Chang-Song Koh, Hiroaki Uehara, Naomi Masui, Masaya Ishibashi, Senya Matsufuji, and Kazuo Harada

Analysis of the spacial requirements for RNA-protein interactions within the N antitermination complex of bacteriophage
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 91-92; doi:10.1093/nass/nrp046 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Subash C. B. Gopinath, Koichi Awazu, Makoto Fujimaki, Junji Tominaga, Kailash C. Gupta, and Penmetcha K. R. Kumar

Monitoring biological interactions using perforated evanescent-field-coupled waveguide-mode nanobiosensors
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 93-94; doi:10.1093/nass/nrp047 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Satoshi Ichikawa, Masaki Otawa, Yasuhiro Teishikata, Koji Yamada, Masahiro Fujimuro, Hideyoshi Yokosawa, and Akira Matsuda

9-(2-C-Cyano-2-deoxy-β-D-arabino-pentofuranosyl)guanine, a potential antitumor agent against B-lymphoma infected with kaposi's sarcoma-associated herpesvirus
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 95-96; doi:10.1093/nass/nrp048 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuhiro Haraguchi, Hisashi Shimada, Genta Akutsu, Keigo Kimura, Hiromichi Tanaka, Takayuki Hamasaki, Masanori Baba, Elizabeth A. Gullen, Ginger E. Dutschman, Yung-Chi Cheng, and Jan Balzarini

Synthesis and anti-HIV activity of 4'-C-ethynyl-2'-deoxy-4'-thio-nucleosides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 97-98; doi:10.1093/nass/nrp049 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yutaka Kubota, Mariko Ehara, Hiroki Kumamoto, Hisashi Shimada, Kazuhiro Haraguchi, and Hiromichi Tanaka

Synthesis of 4'-substituted cordycepins via benzenesulfenylation at the 4'-position as a key step
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 99-100; doi:10.1093/nass/nrp050 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hiroki Kumamoto, Marina Kobayashi, and Hiromichi Tanaka

Synthesis of 5'-fluoro-2'-β-methylneplanocin analogues
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 101-102; doi:10.1093/nass/nrp051 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masahiro Ikejiri, Takayuki Ohshima, Akemi Fukushima, Kunitada Shimotohno, and Tokumi Maruyama

Synthesis and anti-HCV activity of 2',5'-deoxy-5'-phenacyladenosine analogs
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 103-104; doi:10.1093/nass/nrp052 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Nkaelang Modutlwa, Hiroyuki Tada, Yoshiki Sugahara, Koichi Shiraki, Nobuyuki Hara, Yoshihiro Deyashiki, Takayuki Ando, Tomohiro Maegawa, Yasunari Monguchi, and Hironao Sajiki

Synthesis of deuterated benzyladenine and its application as a surrogate
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 105-106; doi:10.1093/nass/nrp053 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takeshi Baba, Tetsuya Kodama, Takeshi Imanishi, and Satoshi Obika

Synthesis and properties of a novel artificial nucleoside that acts as a redox switch
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 107-108; doi:10.1093/nass/nrp054 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hisao Saneyoshi, Stefania Mazzini, Anna Aviñó, Guillem Portella, Carlos González, Modesto Orozco, Victor E. Marquez, and Ramon Eritja

The use of conformationally rigid nucleoside probes to study the role of sugar pucker and nucleobase orientation in the thrombin binding aptamer
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 109-110; doi:10.1093/nass/nrp055 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Natsuhisa Oka, Renpei Higashida, Yuji Takayama, Kaori Ando, and Takeshi Wada

Chemical synthesis of nucleoside H-boranophosphonates and their application as precursors of P-modified nucleotide analogues
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 111-112; doi:10.1093/nass/nrp056 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Rintaro Iwata, Masafumi Sudo, Kenta Nagafuji, and Takeshi Wada

Stabilization of A-type nucleic acid duplexes by novel oligodiaminosaccharides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 113-114; doi:10.1093/nass/nrp057 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Ken Yamada, Hirosuke Tsunoda, Akihiro Ohkubo, Kohji Seio, and Mitsuo Sekine

Synthesis and hybridization properties of oligonucleotides having 4-N-(pyrrol-2-ylcarbonyl)deoxycytidine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 115-116; doi:10.1093/nass/nrp058 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yusuke Oeda, Yoshihiro Iijima, Hirosuke Tsunoda, Akihiro Okubo, Kohji Seio, and Mitsuo Sekine

Synthesis and properties of new RNA molecules incorporating 2'-O-aryluridine derivatives
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 117-118; doi:10.1093/nass/nrp059 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Reiko Iwase, Rina Kurokawa, and Junpei Ueno

Synthesis of modified double stranded RNAs containing duplex regions between amide-linked RNA and RNA at both ends and enhanced nuclease resistance
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 119-120; doi:10.1093/nass/nrp060 [Abstract] [PDF] [Request Permissions]  

Get checked abstract A. A. Iglina, M. I. Meschaninova, and A. G. Venyaminova

5'-Lipophilic conjugates of oligonucleotides as components of cell delivery systems
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 121-122; doi:10.1093/nass/nrp061 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kumi Nagaoka, Seiya Kito, Yoshiaki Kitamura, Yoshihito Ueno, and Yukio Kitade

Introduction of 8-methyladenosine into 2', 5'-oligoadenylate (2-5A) 2'-terminus induces dramatic shift in binding site of RNase L
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 123-124; doi:10.1093/nass/nrp062 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Noriaki Minakawa, Shintaro Ogata, Mayumi Takahashi, and Akira Matsuda

Unnatural imidazopyridopyrimidine:naphthyridine base pairs: selective incorporation and extension reaction by DNA polymerases
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 125-126; doi:10.1093/nass/nrp063 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hirosuke Tsunoda, Akihiro Ohkubo, Kohji Seio, and Mitsuo Sekine

Evaluation of base recognition abilities of 2'-deoxynucleoside N-oxide derivatives by polymerase reactions
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 127-128; doi:10.1093/nass/nrp064 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masahide Ishikawa, Ryuta Murai, Hiroyuki Hagiwara, Tetsuya Hoshino, and Kamui Suyama

Preparation of eukaryotic mRNA having differently methylated adenosine at the 5'-terminus and the effect of the methyl group in translation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 129-130; doi:10.1093/nass/nrp065 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yosuke Tanimizu, Tadao Takada, Mitsunobu Nakamura, and Kazushige Yamana

Synthesis and characterization of deoxyuridine triphosphates labeled with pyrene
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 131-132; doi:10.1093/nass/nrp066 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Minoru Fukuda, Mitsunobu Nakamura, Tadao Takada, and Kazushige Yamana

Duplex formation of multiple pyrene-modified RNAs
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 133-134; doi:10.1093/nass/nrp067 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Wataru Hirose, Kousuke Sato, and Akira Matsuda

Synthesis and properties of new fluorescent nucleosides and oligodeoxynucleotides derived from 5-formyl-2'-deoxyuridine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 135-136; doi:10.1093/nass/nrp068 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masayasu Kuwahara, Atsushi Kobayashi, Masayoshi Tajima, Shunsuke Kitazume, Keisuke Anahara, Hiroaki Ozaki, and Seiji Tobita

Fluorescent properties of acridonyl group in DNA duplex
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 137-138; doi:10.1093/nass/nrp069 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Alexandre S. Boutorine, Osman Doluca, and Vyacheslav V. Filichev

Optimization of the sequence of twisted intercalating nucleic acids (TINA) forming triple helix with the polypurine tract of the proviral HIV DNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 139-140; doi:10.1093/nass/nrp070 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Katsuhiko Matsumoto, Yuta Shinohara, Kyoko Numajiri, Shinya Ishioroshi, Takashi Morii, Yoshio Saito, and Isao Saito

Design of extremely facile 3'- and 5'- ends free molecular beacons using C8 alkylamino substituted 2'-deoxyguanosine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 141-142; doi:10.1093/nass/nrp071 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Svetlana A. Kholodar, Daria S. Novopashina, Mariya I. Meschaninova, Alexander A. Lomzov, and Alya G. Venyaminova

Multipyrene tandem probes for detection of C677T polymorphism in MTHFR gene
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 143-144; doi:10.1093/nass/nrp072 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yusuke Hasegawa, Mitsunobu Nakamura, Tadao Takada, and Kazushige Yamana

Synthesis and hybridization of oligonucleotides attached to a redox reporter via ethenyl linker at 5-position of pyrimidine base
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 145-146; doi:10.1093/nass/nrp073 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shinobu Sato, Keiichi Ohtsuka, and Shigeori Takenaka

Immobilization of a naphthalene diimide-DNA complex on the gold through dithiolane moieties
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 147-148; doi:10.1093/nass/nrp074 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Dalip Sethi, Pradeep Kumar, and K.C. Gupta

Strategies for preparation of oligonucleotide biochips and their applications
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 149-150; doi:10.1093/nass/nrp075 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshitaka Higuchi, Mariko Aso, Ryouko Harada, Noboru Koga, and Hiroshi Suemune

Evaluation of mobility of 2-N-tert-butylaminoxyladenosine incorporated into oligodeoxynucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 151-152; doi:10.1093/nass/nrp076 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Reiko Waki, Takako Ueda, Asako Yamayoshi, Akio Kobori, and Akira Murakami

Real-time monitoring of mRNAs with fluorescence-modified RNA probes in living cells
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 153-154; doi:10.1093/nass/nrp077 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shuji Ikeda, Takeshi Kubota, Hiroyuki Yanagisawa, Mizue Yuki, and Akimitsu Okamoto

Synthesis of exciton-controlled fluorescent probes for RNA imaging
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 155-156; doi:10.1093/nass/nrp078 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Aya Shibata, Hiroshi Abe, Kazuhiro Furukawa, Satoshi Tsuneda, and Yoshihiro Ito

Protein detection using oligonucleotide probes
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 157-158; doi:10.1093/nass/nrp079 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kiyomi Sasaki, S. M. Abdur Rahman, Norihiro Sato, Satoshi Obika, Takeshi Imanishi, and Hidetaka Torigoe

Promotion of triplex formation by 3'-amino-2'-O,4'-C-methylene bridged nucleic acid modification
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 159-160; doi:10.1093/nass/nrp080 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takumi Ishizuka, Stefano Sforza, and Makoto Komiyama

Promotion of strand invasion by utilizing entropically-favored PNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 161-162; doi:10.1093/nass/nrp081 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takashi Kanamori, Hirosuke Tsunoda, Akihiro Ohkubo, Mitsuo Sekine, and Kohji Seio

Development of new DNA triplex triads by using 5-substituted deoxycytidine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 163-164; doi:10.1093/nass/nrp082 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Itaru Okamoto, Shota Ito, Takashi Ono, and Akira Ono

Synthesis and thermal denaturation studies of covalently linked DNA triplexes
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 165-166; doi:10.1093/nass/nrp083 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yosuke Taniguchi, Yusuke Kurose, Takamasa Nishioka, Fumi Nagatsugi, and Shigeki Sasaki

Evaluation of the antisense effect of PEGylated oligodeoxynucleotides containing intelligent nucleoside analogues
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 167-168; doi:10.1093/nass/nrp084 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shuhei Kusano, Keiichi Hattori, Shuhei Imoto, and Fumi Nagatsugi

Design and synthesis of the novel cross-linking agent
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 169-170; doi:10.1093/nass/nrp085 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tomonori Shibata, Chikara Dohno, and Kazuhiko Nakatani

DNA cross-link generated by a novel modified DNA containing a formyl group
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 171-172; doi:10.1093/nass/nrp086 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuta Kawano, Tadao Takada, Mitsunobu Nakamura, and Kazushige Yamana

DNA ligation using photoremovable protecting groups
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 173-174; doi:10.1093/nass/nrp087 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuichiro Aiba and Makoto Komiyama

Handy and prompt DNA separation using PNA with internal disulfide bond
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 175-176; doi:10.1093/nass/nrp088 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Eiji Matsumoto, Kazuhito Tanabe, and Sei-ichi Nishimoto

Radiolytic one-electron reductive cyclization of oligodeoxynucleotides possessing a disulfide bond
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 177-178; doi:10.1093/nass/nrp089 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tetsuo Kozasa, Yukako Miyakawa, Miyako Fukushi, Akira Ono, and Hidetaka Torigoe

Development of a novel method to determine the concentration of heavy metal cations: Application of the specific interaction between heavy metal cation and mismatch DNA base pair
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 179-180; doi:10.1093/nass/nrp090 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Toru Matsui, Hideaki Miyachi, Yasuyuki Nakanishi, Yasuteru Shigeta, Yasutaka Kitagawa, Mitsutaka Okumura, and Kimihiko Hirao

Electronic structure and UV absorption spectra of metal-mediate DNA: an approach from theoretical chemistry
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 181-182; doi:10.1093/nass/nrp091 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuo Tanaka, Narufumi Kitamura, Kenichi Inafuku, and Yoshiki Chujo

Acceleration of guanine oxidation under visible light irradiation by photon upconversion based on triplet–triplet annihilation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 183-184; doi:10.1093/nass/nrp092 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Eriko Tomi, Mariko Aso, Satoshi Inoue, Yukiko Toguchi, Kazuteru Usui, Mai Hamdy Azam, Akiko Jinnouchi, and Hiroshi Suemune

Photochemical generation and reaction of 2'-substituted analogues of C4'-oxidized abasic lesion
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 185-186; doi:10.1093/nass/nrp093 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kunihiko Morihiro, Tetsuya Kodama, Masaru Nishida, Takeshi Imanishi, and Satoshi Obika

Development of light-responsive BNA toward the spatiotemporal control of gene expression
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 187-188; doi:10.1093/nass/nrp094 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Xingguo Liang, Toshio Mochizuki, Hidenori Nishioka, and Hiroyuki Asanuma

Line up base pairs and intercalators one by one in a stable duplex
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 189-190; doi:10.1093/nass/nrp095 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shinjiro Sawada, Ichiro Imada, Nobuo Kato, and Kunihiro Kaihatsu

Regulation of duplex DNA strand displacement by visible light sensitive bis-peptide nucleic acid
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 191-192; doi:10.1093/nass/nrp096 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshio Saito, Yoshiki Takeuchi, Katsuhiko Matsumoto, Naoya Takahashi, Azusa Suzuki, and Isao Saito

Photo-switching of vinylpyrene-substituted 2'-deoxyguanosine and its application
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 193-194; doi:10.1093/nass/nrp097 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shinzi Ogasawara and Mizuo Maeda

Photo-controllable aptamer
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 195-196; doi:10.1093/nass/nrp098 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshinaga Yoshimura, Tomoko Ohtake, Hajime Okada, and Kenzo Fujimoto

Development of a rapid and reversible photocrosslinking of RNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 197-198; doi:10.1093/nass/nrp099 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshinaga Yoshimura, Hajime Okada, Tomoko Ohtake, Tadashi Tsukaguchi, and Kenzo Fujimoto

A selective and sensitive detection of SNP between rice cultivars by using DNA photoligation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 199-200; doi:10.1093/nass/nrp100 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takeo Ito, Aiko Hayashi, Tsukasa Uchida, Kazuhito Tanabe, Hisatsugu Yamada, and Sei-ichi Nishimoto

Photoinduced electron transfer reaction in diaminostilbene-tethered DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 201-202; doi:10.1093/nass/nrp101 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takehiro Ami, Masayuki Ogino, Yuuta Taya, Yumiko Takemura, and Kenzo Fujimoto

A photochemical detection of methylcytosine by using hydrophobic interaction
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 203-204; doi:10.1093/nass/nrp102 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuhito Tanabe, Hisatsugu Yamada, Takeo Ito, and Sei-ichi Nishimoto

Photoelectrochemical identification of 5-methylcytosine modification in DNA: combination of photosensitization and enzymatic cleavage
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 205-206; doi:10.1093/nass/nrp103 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akiko Nomura, Kazuki Tainaka, and Akimitsu Okamoto

Osmium complex binding to mismatched methylcytosine: effect of adjacent bases
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 207-208; doi:10.1093/nass/nrp104 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hisatsugu Yamada, Yuya Kitauchi, Kazuhito Tanabe, Takeo Ito, and Sei-ichi Nishimoto

Efficient photooxidative strand cleavage at 5-methylcytosine in DNA by sensitization with 9,10-anthraquinone-tethered oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 209-210; doi:10.1093/nass/nrp105 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Koichi Nishimura, Yukari Totsuka, Takashi Higuchi, Nobuo Kawahara, Takashi Sugimura, and Keiji Wakabayashi

Analysis of an RNA adduct formed from aminophenylnorharman
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 211-212; doi:10.1093/nass/nrp106 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Naoyuki Matsumoto, Ryosuke Hayashi, Masayuki Himoto, Isao Kuraoka, Sayuri Morita, Fuki Hagiwara, Katsuo Katayanagi, Hiroshi Ide, and Shigenori Iwai

Fluorescence detection of the endonuclease III reaction using modified oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 213-214; doi:10.1093/nass/nrp107 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshimi Oka, Fumie Takei, and Kazuhiko Nakatani

Reaction of cytosine with bisulfite and hydroxylamine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 215-216; doi:10.1093/nass/nrp108 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hikoya Hayatsu, Kazuo Negishi, and Yusuke Wataya

Progress in the bisulfite modification of nucleic acids
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 217-218; doi:10.1093/nass/nrp109 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masayuki Morikawa, Teruhiko Kobayashi, Takanobu Kobayashi, Rie Komori, Yoshihisa Sei, Hiroshi Miyazawa, and Katsuhito Kino

The oxidation of 2'-deoxy-8-oxoguanosine by iodine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 219-220; doi:10.1093/nass/nrp110 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Junpei Yamamoto, Kenichi Hitomi, Ryosuke Hayashi, Elizabeth D. Getzoff, and Shigenori Iwai

Recognition and reaction mechanisms of the (6–4) photolyase as determined by using a (6–4) photoproduct analog
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 221-222; doi:10.1093/nass/nrp111 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hiroyuki Kamiya, Kazuya Satou, Mika Hori, Ayaka Yamaguchi, and Hideyoshi Harashima

Roles of specialized DNA polymerases in mutagenesis by oxidized guanine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 223-224; doi:10.1093/nass/nrp112 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Toshiaki Nakano, Amir M.H. Salem, Hiroaki Terato, Seung Pil Pack, Keisuke Makino, and Hiroshi Ide

Comparison of the activities of bacterial and mammalian nucleotide excision repair systems for DNA-protein crosslinks
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 225-226; doi:10.1093/nass/nrp113 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Junji Kawakami, Yuko Tanaka, and Kae Kishimoto

Accurate curve fitting procedure for UV melting analysis of highly thermostable RNA hairpins
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 227-228; doi:10.1093/nass/nrp114 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shu-ichi Nakano, Hidenobu Hirayama, and Naoki Sugimoto

Investigations of the cation binding to nucleotides by monitoring the hairpin-duplex equilibrium of a self-complementary sequence
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 229-230; doi:10.1093/nass/nrp115 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masayuki Tera, Keisuke Iida, Kazuo Shin-ya, and Kazuo Nagasawa

Synthesis of potent G-quadruplex binders of macrocyclic heptaoxazole and evaluation of their activities
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 231-232; doi:10.1093/nass/nrp116 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Keisuke Iida, Masayuki Tera, Kazuo Shin-ya, and Kazuo Nagasawa

G-quadruplex recognition by macrocyclic hexaoxazole (6OTD) dimer
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 233-234; doi:10.1093/nass/nrp117 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hidetaka Torigoe, Eugene Horio, Takashi Takehara, Kaoru Kaneda, and Tetsuo Kozasa

Tetraplex structure of budding yeast telomeric DNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 235-236; doi:10.1093/nass/nrp118 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takeshi Fujimoto, Daisuke Miyoshi, Hisae Tateishi-Karimata, and Naoki Sugimoto

Thermal stability and hydration state of DNA G-quadruplex regulated by loop regions
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 237-238; doi:10.1093/nass/nrp119 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takashi Kimura, Yan Xu, and Makoto Komiyama

Human telomeric RNA r(UAGGGU) sequence forms parallel tetraplex structure with U-quartet
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 239-240; doi:10.1093/nass/nrp120 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kaori Saito, Yusuke Nakano, Hulin Tai, Shigenori Nagatomo, Hikaru Hemmi, Hajime Mita, and Yasuhiko Yamamoto

Characterization of heme coordination structure in heme-DNA complex possessing gaseous molecule as an exogenous ligand
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 241-242; doi:10.1093/nass/nrp121 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hidetaka Torigoe, Eugene Horio, Takashi Takehara, Kaoru Kaneda, and Tetsuo Kozasa

Interaction between tetraplex structure of yeast telomeric DNA and tetraplex-binding ligand
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 243-244; doi:10.1093/nass/nrp122 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kaoru Kaneda and Hidetaka Torigoe

Interaction between tetraplex structure of mouse telomeric DNA and telomeric DNA binding domains of mouse telomere binding protein Pot1
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 245-246; doi:10.1093/nass/nrp123 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kentaro Takahama, Shigeki Arai, Riki Kurokawa, and Takanori Oyoshi

Identification of DNA binding specificity for TLS
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 247-248; doi:10.1093/nass/nrp124 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuichi Kurashina, Xiaohong Liu, Chiemi Kato, Naoki Inoue, Mineo Saneyoshi, and Toyofumi Yamaguchi

Influence of 3'-azido-2',3'-dideoxyguanosine treatment on telomere length in human telomerase-immortalized human fibroblast cells
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 249-250; doi:10.1093/nass/nrp125 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Naohiko Shimada, Arihiro Kano, and Atsushi Maruyama

Design of cationic graft copolymers as a potential inducer of B-Z transition
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 251-252; doi:10.1093/nass/nrp126 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shoichiro Asayama, Miyuki Sudo, and Hiroyoshi Kawakami

Release of DNA binary complexes from the ternary complexes by carboxymethyl Poly(L-histidine)
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 253-254; doi:10.1093/nass/nrp127 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hiroaki Ozaki, Yasuhisa Hagiwara, Hiromi Asakura, and Masayasu Kuwahara

Acridone-labeled DNA aptamer for the detection of biomolecules
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 255-256; doi:10.1093/nass/nrp128 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masatora Fukuda, Liew Fong-Fong, and Takashi Morii

Covalently linked fluorescent ribonucreopeptide sensors
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 257-258; doi:10.1093/nass/nrp129 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shun Nakano, Masatora Fukuda, Tsukasa Mashima, Masato Katahira, and Takashi Morii

Structural aspects for the function of ATP-binding ribonucleopeptide receptors
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 259-260; doi:10.1093/nass/nrp130 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Atsushi Ogawa

Aptazyme-based biosensors using a eukaryotic cell-free translation system
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 261-262; doi:10.1093/nass/nrp131 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akira Wada and Yoshihiro Ito

The highly stabilized ribosome display selection of metal binding peptide aptamers
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 263-264; doi:10.1093/nass/nrp132 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuki Haraguchi, Kanako Kuwasako, Yutaka Muto, Yoshitaka Bessho, Madoka Nishimoto, Shigeyuki Yokoyama, Akio Kanai, Gota Kawai, and Taiichi Sakamoto

Characterization of RNA aptamers against SRP19 protein having sequences different from SRP RNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 265-266; doi:10.1093/nass/nrp133 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tsukasa Mashima, Akimasa Matsugami, Shun Nakano, Masafumi Inoue, Masatora Fukuda, Takashi Morii, and Masato Katahira

Structural analysis of ribonucleopeptide aptamer against ATP
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 267-268; doi:10.1093/nass/nrp134 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Ikumi Kawahara, Kaichiro Haruta, Chojiro Kojima, and Yoshiyuki Tanaka

NMR studies of HAC1 mRNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 269-270; doi:10.1093/nass/nrp135 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Shoko Aoyama, Maki Sugaya, Chisato Kobayashi, Keiko Masuda, Tae Maeda, Taiichi Sakamoto, Gota Kawai, Akira Katoh, and Kazuo Harada

An isostructural G-G to A-A substitution within the HIV RRE RNA switches the specificity towards arginine-rich peptides
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 271-272; doi:10.1093/nass/nrp136 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Misaki Imai, Daisuke Chikatsu, Emire Inomata, Tairo Oshima, and Gota Kawai

Docking simulation of polyamines on a kissing-loop RNA dimer
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 273-274; doi:10.1093/nass/nrp137 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akinori Ochi, So Umekage, and Yo Kikuchi

Non-enzymatic in vitro production of circular hammerhead ribozyme targeting the template region of human telomerase RNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 275-276; doi:10.1093/nass/nrp138 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hisaaki Tateoka, Ikumi Kawahara, Satomi Hasegawa, Kaichiro Haruta, Yoshinori Kondo, Chojiro Kojima, and Yoshiyuki Tanaka

Preparations of hammerhead ribozymes for investigations of their cleavable sequences
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 277-278; doi:10.1093/nass/nrp139 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yusuke Mineta, Tomoyuki Okamoto, Kosuke Takenaka, Norio Doi, Yasuhiro Aoyama, and Takashi Sera

Multiple-turnover cleavage of double-stranded DNA by sandwiched zinc-finger nuclease
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 279-280; doi:10.1093/nass/nrp140 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoshihiro Koshino-Kimura, Kosuke Takenaka, Fumiya Domoto, Masayoshi Ohashi, Toshihide Miyazaki, Yasuhiro Aoyama, and Takashi Sera

Construction of plants resistant to TYLCV by using artificial zinc-finger proteins
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 281-282; doi:10.1093/nass/nrp141 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Mahmoud Kandeel, Aya Kato, Yoshiaki Kitamura, and Yukio Kitade

Thymidylate kinase: The lost chemotherapeutic target
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 283-284; doi:10.1093/nass/nrp142 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tomoya Takahashi, Takuya Ohzawa, Shinjiro Sawada, Nobuo Kato, Naohisa Goto, Shota Nakamura, Teruo Yasunaga, and Kunihiro Kaihatsu

Inhibition of influenza virus infection by targeting genome conserved region with non-natural nucleic acid
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 285-286; doi:10.1093/nass/nrp143 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Hitoshi Suzuki, Hiroshi Saitoh, Tomoyuki Suzuki, and Hiroshi Takaku

Inhibition of influenza virus by baculovirus-mediated shRNA
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 287-288; doi:10.1093/nass/nrp144 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tomoaki Mori, Jun Sasaki, Yasuhiro Aoyama, and Takashi Sera

Regulation of vascular endothelial growth factor gene under hypoxia by using artificial transcription factors
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 289-290; doi:10.1093/nass/nrp145 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yusuke Wataya, Tomoharu Naito, Akira Sato, Akiko Hiramoto, Yukio Kitade, Takuma Sasaki, Akira Matsuda, Masakazu Fukushima, and Hye-Sook Kim

Molecular mechanisms of apoptosis induced by 3'-ethynylcytidine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 291-292; doi:10.1093/nass/nrp146 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Akira Sato, Akito Satake, Akiko Hiramoto, Akiko Okamatsu, Kentaro Nakama, Hye-Sook Kim, and Yusuke Wataya

Association of nuclear-intermediate filament lamin B1 with necrotic- and apoptotic-morphologies in cell death Induced by 5-fluoro-2'-deoxyuridine
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 293-294; doi:10.1093/nass/nrp147 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takashi Yokogawa, Hanim Munirah Binti Che Hassan, Yukiko Yokota, Satoshi Ohno, and Kazuya Nishikawa

Preparation of an ochre suppressor tRNA recognizing exclusively UAA codon by using the molecular surgery technique
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 295-296; doi:10.1093/nass/nrp148 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Issei Iijima and Takahiro Hohsaka

Screening of amber suppressor tRNAs suitable to introduce nonnatural amino acids into proteins by real-time monitoring of cell-free translation
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 297-298; doi:10.1093/nass/nrp149 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yuichiro Nomura, Takashi Yokogawa, Shigeo Yoshinari, Yoh-ichi Watanabe, Satoshi Ohno, and Kazuya Nishikawa

Detection of enzymatic activities related to the tRNA splicing pathway in Methanosarcina acetivorans cell extract
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 299-300; doi:10.1093/nass/nrp150 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Takayuki Ohira, Kenjyo Miyauchi, Yuriko Sakaguchi, Takeo Suzuki, and Tsutomu Suzuki

Precise analysis of modification status at various stage of tRNA maturation in Saccharomyces cerevisiae
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 301-302; doi:10.1093/nass/nrp151 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuki Okada, Yuki Muneyoshi, Yaeta Endo, and Hiroyuki Hori

Production of yeast (m²G10) methyltransferase (Trm11 and Trm112 complex) in a wheat germ cell-free translation system
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 303-304; doi:10.1093/nass/nrp152 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Masataka Une, Daisuke Kurita, Akira Muto, and Hyouta Himeno

Trans-translation by tmRNA and SmpB
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 305-306; doi:10.1093/nass/nrp153 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yoichi Hase, Shinichiro Yokoyama, Takatugu Kimura, Shimon Goto, Akira Muto, and Hyouta Himeno

Physiological role of RsgA in ribosome biosynthesis
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 307-308; doi:10.1093/nass/nrp154 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Yasunori Yamada, Takuya Kodera, Kaori Ohishi, Kohichi Kaneda, and Toshio Shida

Incipient complex formation between AP endonucleases and DNA containing AP site: A vital role of the tryptophan residue
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 309-310; doi:10.1093/nass/nrp155 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Fumiya Uni, Sunmi Lee, Rie Yatsunami, Toshiaki Fukui, and Satoshi Nakamura

Role of exposed aromatic residues in substrate-binding of CBM family 5 chitin-binding domain of alkaline chitinase
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 311-312; doi:10.1093/nass/nrp156 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Tsuyoshi Kimura, Hokuto Konno, Toshiya Fujisato, and Akio Kishida

Expression behavior of high-pressure-compacted plasmid DNA in mammalian cell
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 313-314; doi:10.1093/nass/nrp157 [Abstract] [PDF] [Request Permissions]  

Get checked abstract Kazuo Yoshida, Yuki Nasu, Nozomi Shitami, Hitoko Toyoda, Hitomi Takemura, and Kiyomi Oomori

A novel convenient method for high bacteriophage titer assay
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 315-316; doi:10.1093/nass/nrp158 [Abstract] [PDF] [Request Permissions]  

Index

Author index
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: 317-319; doi:10.1093/nass/nrp159 [PDF] [Request Permissions]  

Covers

Covers
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: i-iv; doi:10.1093/nass/nrp160 [PDF] [Request Permissions]  

Prelims

Prelims
NUCLEIC ACIDS SYMP SER (OXF) 2009 53: v-xi; doi:10.1093/nass/nrp191 [PDF] [Request Permissions]  

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