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Previous 		Contents: No. 52, September 2008   [Index by Author] 

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Joint Symposium of the 18th International Roundtable on Nucleosides, Nucleotides and Nucleic Acids and the 35th International Symposium on Nucleic Acids Chemistry

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Dinshaw J. Patel
Structural Biology of Riboswitch-mediated Gene Regulation and Argonaute-mediated Gene Silencing
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 1; doi:10.1093/nass/nrn001 [PDF] [Request Permissions]  

Karl Börjesson, Peter Sandin, Bo Albinsson, Jerker Mårtensson, Tom Brown, and L. Marcus Wilhelmsson
Characterization and Use of Tricyclic Fluorescent Nucleic Acid Base Analogues
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 3-4; doi:10.1093/nass/nrn002 [Abstract] [PDF] [Request Permissions]  

Poul Nielsen, Khalil I. Shaikh, Lise J. Nielsen, Nicolai K. Andersen, Lucie Spácilová, Henrik Nielsen, Petr Kocalka, and Mikkel S. Christensen
Nucleic acid duplexes with zippers of additional nucleobases and aromatics in minor or major groove
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 5-6; doi:10.1093/nass/nrn003 [Abstract] [PDF] [Request Permissions]  

Anne De Cian, Julien Gros, Aurore Guédin, Meriem Haddi, Sébastien Lyonnais, Lionel Guittat, Jean-François Riou, Chantal Trentesaux, Barbara Saccà, Laurent Lacroix, Patrizia Alberti, and Jean-Louis Mergny
DNA and RNA Quadruplex ligands
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 7-8; doi:10.1093/nass/nrn004 [Abstract] [PDF] [Request Permissions]  

Daniela Montesarchio
G-quadruplex forming oligonucleotides as finely tunable aptamers: towards better DNA mimics
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 9-10; doi:10.1093/nass/nrn005 [Abstract] [PDF] [Request Permissions]  

Dipankar Sen
The use of light to investigate and modulate DNA and RNA conformations
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 11-12; doi:10.1093/nass/nrn006 [Abstract] [PDF] [Request Permissions]  

Kazuo Harada, Maki Sugaya, Futoshi Nishimura, and Akira Katoh
Manipulation of the peptide-binding specificity of an RNA in a rational manner by combinations of specificity-altering mutations
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 13-14; doi:10.1093/nass/nrn007 [Abstract] [PDF] [Request Permissions]  

Charles R. Cantor
Quantitative, Sensitive Analysis of DNA and RNA
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 15; doi:10.1093/nass/nrn008 [Abstract] [PDF] [Request Permissions]  

Eike Friedrichs, Angeliki Tsokou, Ralf Jungmann, and Friedrich Simmel
Artificial molecular switches made from DNA
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 17-18; doi:10.1093/nass/nrn009 [Abstract] [PDF] [Request Permissions]  

Xingguo Liang, Kenta Fujioka, Yuichiro Tsuda, Ryuji Wakuda, and Hiroyuki Asanuma
Construction of a photo-switchable gene for turning on and off gene expression with light irradiation
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 19-20; doi:10.1093/nass/nrn010 [Abstract] [PDF] [Request Permissions]  

Ulla Jakobsen, Adam C. Simonsen, and Stefan Vogel
DNA Controlled Assembly of Liposomes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 21-22; doi:10.1093/nass/nrn011 [Abstract] [PDF] [Request Permissions]  

Yuko Osawa, Hiroaki Motoki, Takafumi Matsuo, Michio Horiuchi, Koji Sode, and Kazunori Ikebukuro
Zinc finger protein-based detection system of PCR products for pathogen diagnosis
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 23-24; doi:10.1093/nass/nrn012 [Abstract] [PDF] [Request Permissions]  

Nitin Puri, Xiaohui Wang, Rajeev Varma, Chris Burnett, Lesslie Beauchamp, Diana M. Batten, Michelle Young, Vivian Sule, Kathy Latham, Tim Sendera, Chris Echeverri, Christophe Sachse, and Susan Magdaleno
LNA® incorporated siRNAs exhibit lower off-target effects compared to 2'-OMethoxy in Cell Phenotypic Assays and Microarray Analysis
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 25-26; doi:10.1093/nass/nrn013 [Abstract] [PDF] [Request Permissions]  

C. I. Edvard Smith, Karin E. Lundin, Oscar E. Simonson, Pedro M.D. Moreno, Mathias G. Svahn, Malgorzata Wenska, and Roger Strömberg
Building Biologically Active Nucleic Acid Nanocomplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 27-28; doi:10.1093/nass/nrn014 [Abstract] [PDF] [Request Permissions]  

Oliver Seitz, Tom N. Grossmann, Stefanie Thurley, and Lars Röglin
Recognizing and Controlling Biomolecules with "Smart" Hybridization-based Switches
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 29-30; doi:10.1093/nass/nrn015 [Abstract] [PDF] [Request Permissions]  

Gabriela D. Ivanova, Martin M. Fabani, Andrey A. Arzumanov, Rachida Abes, Haifang Yin, Bernard Lebleu, Matthew Wood, and Michael J Gait
PNA-peptide conjugates as intracellular gene control agents
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 31-32; doi:10.1093/nass/nrn016 [Abstract] [PDF] [Request Permissions]  

Benoît Y. Michel, Kollappillil S. Krishnakumar, Magnus Johansson, Måns Ehrenberg, and Peter Strazewski
Structural and functional prerequisites for ribosomal nascentpeptide acceptors: Attempts to decipher the nature of the ribosome's catalysis of peptide bond formation.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 33-34; doi:10.1093/nass/nrn017 [Abstract] [PDF] [Request Permissions]  

Jeremy G. Lackey and Masad J. Damha
The acetal levulinyl ester (ALE) group for the 2'-hydroxyl protection of ribonucleosides and the synthesis of oligoribonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 35-36; doi:10.1093/nass/nrn018 [Abstract] [PDF] [Request Permissions]  

Erik B. Pedersen, Amany M. A. Osman, Daniel Globisch, Manikandan Paramasivam, Susanna Cogoi, Niels Bomholt, Per T. Jørgensen, Luigi E. Xodo, and Vyacheslav V. Filichev
Triplex glue by synthesizing conjugated flexible intercalators
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 37-38; doi:10.1093/nass/nrn019 [Abstract] [PDF] [Request Permissions]  

Mitsuo Sekine, Akihiro Ohkubo, and Kohji Seio
New strategies for the synthesis of unmodified and modified oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 39-40; doi:10.1093/nass/nrn020 [Abstract] [PDF] [Request Permissions]  

Malgorzata Sierant, Katarzyna Kubiak, Julia Kazmierczak-Baranska, Alina Paduszynska, Tomoko Kuwabara, Masaki Warashina, Benedetta Nacmias, Sandro Sorbi, and Barbara Nawrot
RNA interference in silencing of genes of Alzheimer's disease in cellular and rat brain models
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 41-42; doi:10.1093/nass/nrn021 [Abstract] [PDF] [Request Permissions]  

Yusuke Kurose, Yosuke Taniguchi, Fumi Nagatsugi, and Shigeki Sasaki
Synthesis of the new nucleoside analogue connecting 2-amino-6-vinylpurine to the 2'-deoxyribose skeleton via the methylene linker
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 43-44; doi:10.1093/nass/nrn022 [Abstract] [PDF] [Request Permissions]  

Troels Koch
Potent single stranded RNA inhibition
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 45; doi:10.1093/nass/nrn023 [Abstract] [PDF] [Request Permissions]  

François Morvan, Albert Meyer, Gwladys Pourceau, Sébastien Vidal, Yann Chevolot, Eliane Souteyrand, and Jean-Jacques Vasseur
Click chemistry and Oligonucleotides: How a simple reaction can do so much
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 47-48; doi:10.1093/nass/nrn024 [Abstract] [PDF] [Request Permissions]  

Natalia Tretyakova, Rebecca Guza, and Brock Matter
Endogenous cytosine methylation and the formation of carcinogen carcinogen–DNA adducts
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 49-50; doi:10.1093/nass/nrn025 [Abstract] [PDF] [Request Permissions]  

Thomas Lavergne, Anthony Martin, Françoise Debart, and Jean-Jacques Vasseur
A Whole Base-Labile Strategy for RNA Synthesis with 2'-O-acetalester Protections
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 51-52; doi:10.1093/nass/nrn026 [Abstract] [PDF] [Request Permissions]  

Michal Hocek, Milan Vrábel, Hana Cahová, Jan Riedl, Lubica Kalachová, Hana Pivonková, Petra Horáková, Ludek Havran, and Miroslav Fojta
Novel base-functionalized DNA. Efficient methodology for construction and bioanalytical applications
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 53-54; doi:10.1093/nass/nrn027 [Abstract] [PDF] [Request Permissions]  

Jacek Cieslak, Andrzej Grajkowski, Cristina Ausín, and Serge L. Beaucage
Recent Developments in the Synthesis of RNA Oligonucleotides for Potential Therapeutic Applications.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 55-56; doi:10.1093/nass/nrn028 [Abstract] [PDF] [Request Permissions]  

Hiroshi Ide, Toshiaki Nakano, Amir M.H. Salem, Hiroaki Terato, Seung Pil Pack, and Keisuke Makino
Repair of DNA-protein crosslink damage: Coordinated actions of nucleotide excision repair and homologous recombination
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 57-58; doi:10.1093/nass/nrn029 [Abstract] [PDF] [Request Permissions]  

Mikiko C. Siomi and Haruhiko Siomi
Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 59-60; doi:10.1093/nass/nrn030 [Abstract] [PDF] [Request Permissions]  

Christian Maasch, Klaus Buchner, Dirk Eulberg, Stefan Vonhoff, and Sven Klussmann
Physicochemical Stability of NOX-E36, a 40mer L-RNA (Spiegelmer) for Therapeutic Applications
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 61-62; doi:10.1093/nass/nrn031 [Abstract] [PDF] [Request Permissions]  

Diana Rothe, Denise Werk, Mariola Dutkiewicz, Steffen Schubert, Hans-Peter Grunert, Heinz Zeichhardt, Volker A. Erdmann, Henry Fechner, and Jens Kurreck
Inhibition of picornaviruses by means of RNA interference
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 63-64; doi:10.1093/nass/nrn032 [Abstract] [PDF] [Request Permissions]  

Yanrong Wu, Youngmi Kim, and Weihong Tan
Molecular engineering of DNA bases: Building block for functional molecular probes in biomedicine
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 65-66; doi:10.1093/nass/nrn033 [PDF] [Request Permissions]  

Nora Zingler, Amanda Solem, and Anna Marie Pyle
Protein-Facilitated Ribozyme Folding and Catalysis
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 67-68; doi:10.1093/nass/nrn034 [Abstract] [PDF] [Request Permissions]  

Balkrishen Bhat, Christine Esau, Scott Davis, Stephanie Propp, Garth Kinberger, Hans Gaus, Susan Freier, Eric E. Swayze, and C. Frank Bennett
2'-O-Methoxyethyl/2'-Fluoro Modified Oligonucleotides Result in More Potent Inhibition of micro RNA-122 in Vivo: A Target implicatedin HCV Replication
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 69; doi:10.1093/nass/nrn035 [Abstract] [PDF] [Request Permissions]  

Yoshio Kato
An efficient fluorescent method for selective detection of mature miRNA species
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 71-72; doi:10.1093/nass/nrn036 [Abstract] [PDF] [Request Permissions]  

Marcel Hollenstein, Christopher Hipolito, Curtis Lam, and David Perrin
In vitro selection of a DNAzyme with three modified nucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 73-74; doi:10.1093/nass/nrn037 [Abstract] [PDF] [Request Permissions]  

Vern L. Schramm, Jemy A. Gutierrez, Grace Cordovano, Indranil Basu, Chandan Guha, Thomas J. Belbin, Gary B. Evans, Peter C. Tyler, and Richard H. Furneaux
Transition state analogues in quorum sensing and SAM recycling
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 75-76; doi:10.1093/nass/nrn038 [Abstract] [PDF] [Request Permissions]  

Satoshi Ichikawa and Akira Matsuda
Chemistry and Structure-Activity Relationship of Antibacterial Nucleoside Natural Products
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 77-78; doi:10.1093/nass/nrn039 [Abstract] [PDF] [Request Permissions]  

Lak Shin Jeong
Development of A3 Adenosine Receptor Ligands
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 79-80; doi:10.1093/nass/nrn040 [Abstract] [PDF] [Request Permissions]  

Marcus A. Cheek, Mikhail I. Dobrikov, Charlotta K. Wennefors, Zhihong Xu, Syed Nadeem Hashmi, Xiaoying Shen, and Barbara Ramsay Shaw
Synthesis and properties of ({alpha}-P-borano)-nucleoside 5'-triphosphate analogues as potential antiviral agents
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 81-82; doi:10.1093/nass/nrn041 [Abstract] [PDF] [Request Permissions]  

C. Meier, H. J. Jessen, and J. Balzarini
Nucleoside Diphosphate Prodrugs
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 83-84; doi:10.1093/nass/nrn042 [Abstract] [PDF] [Request Permissions]  

Lakshmi P. Kotra and Emil F. Pai
Inhibition of Orotidine-5'-monophosphate decarboxylase – Discoveries and lessons
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 85-86; doi:10.1093/nass/nrn043 [Abstract] [PDF] [Request Permissions]  

Hideyoshi Harashima
Multifunctional envelope type nano device for non-viral gene delivery: Concept and application for nanomedicine
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 87; doi:10.1093/nass/nrn044 [PDF] [Request Permissions]  

Yuyan Zhao and Hongbin (Tony) Yan
Preparation of Mannosylated Oligoribonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 89-90; doi:10.1093/nass/nrn046 [Abstract] [PDF] [Request Permissions]  

Gaelle Creusat and Guy Zuber
Tyrosine-modified PEI: A novel and highly efficient vector for siRNA delivery in mammalian cells
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 91-92; doi:10.1093/nass/nrn047 [Abstract] [PDF] [Request Permissions]  

Yan Liu and Hao Yan
Designer DNA Architectures for Nanobiotechnology
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 93-94; doi:10.1093/nass/nrn048 [PDF] [Request Permissions]  

Frederick D. Lewis
DNA electron transfer mechanism and dynamics
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 95-96; doi:10.1093/nass/nrn049 [Abstract] [PDF] [Request Permissions]  

John Tumpane, Erik P. Lundberg, L. Marcus Wilhelmsson, Tom Brown, and Bengt Nordén
Addressable Molecular Node Assembly – Functional DNA Nanostructures
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 97-98; doi:10.1093/nass/nrn050 [Abstract] [PDF] [Request Permissions]  

Alba Díaz-Rodríguez, Susana Fernández, Yogesh S. Sanghvi, Emmanuel A. Theodorakis, Vicente Gotor, and Miguel Ferrero
Synthesis of 2',3'-Cyclohexene Bicyclic Nucleoside Analogues as Antiviral Compounds
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 99-100; doi:10.1093/nass/nrn051 [Abstract] [PDF] [Request Permissions]  

Tatiana Rodríguez-Pérez, Susana Fernández, Yogesh S. Sanghvi, Vicente Goto, and Miguel Ferrero
Preparation of Nucleoside-Carbohydrate Phosphodiester Prodrug Analogues by Chemoenzymatic Procedure
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 101-102; doi:10.1093/nass/nrn052 [Abstract] [PDF] [Request Permissions]  

Suresh C. Srivastava, Divya Pandey, Naveen P. Srivastava, and Satya P. Bajpai
RNA Synthesis: Phosphoramidites for RNA synthesis in the reverse direction. Highly efficient synthesis and application to convenient introduction of ligands, chromophores and modifications of synthetic RNA at the 3'- end.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 103-104; doi:10.1093/nass/nrn053 [Abstract] [PDF] [Request Permissions]  

A.S. Boutorine, W. Buchmann, L. Halby, and E. De Pauw
Studies of sequence-specific recognition and interaction of bishairpin polyamide minor groove binders with target DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 105-106; doi:10.1093/nass/nrn054 [Abstract] [PDF] [Request Permissions]  

John A. Brazier, Ippei Onishi, and Shigeki Sasaki
Binding of two bis-bipyridine minor groove binders to a DNA template in the presence of Cu2+ ions
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 107-108; doi:10.1093/nass/nrn055 [Abstract] [PDF] [Request Permissions]  

Matthias Bahr, Valerie Gabélica, Anton Granzhan, Elmar Weinhold, and Marie-Paule Teulade-Fichou
Recognition of Homopyrimidine Mismatches by Distance-Constrained Macrocyclic bisintercalators.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 109-110; doi:10.1093/nass/nrn056 [Abstract] [PDF] [Request Permissions]  

Takuma Katayama and Hidetaka Torigoe
The interaction between the purine motif triplex and the triplex DNA-binding domain of Saccharomyces cerevisiae Stm1 protein
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 111-112; doi:10.1093/nass/nrn057 [Abstract] [PDF] [Request Permissions]  

Naohiko Shimada, Arihiro Kano, and Atsushi Maruyama
Effect of cationic comb-type copolymer on the B- Z transition of poly(dG-dC)·poly(dG-dC)
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 113-114; doi:10.1093/nass/nrn058 [Abstract] [PDF] [Request Permissions]  

Eriko Kanai, Seiichi Nishizawa, and Norio Teramae
A pteridine derivative with electron-withdrawing groups for binding and sensing of nucleobases in AP site-containing DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 115-116; doi:10.1093/nass/nrn059 [Abstract] [PDF] [Request Permissions]  

Toshiki Ichihashi, Yusuke Sato, Takehiro Seino, Seiichi Nishizawa, and Norio Teramae
Effect of an alkyl amino group on the binding of 1,8-naphthyridines to AP site-containing DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 117-118; doi:10.1093/nass/nrn060 [Abstract] [PDF] [Request Permissions]  

Tomoe Kageyama, Yusuke Sato, Seiichi Nishizawa, and Norio Teramae
Competitive binding of small ligands to nucleobases in AP site-containing DNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 119-120; doi:10.1093/nass/nrn061 [Abstract] [PDF] [Request Permissions]  

Yusuke Sato, Seiichi Nishizawa, and Norio Teramae
Development of label-free molecular beacons based on abasic sitebinding fluorescence molecules
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 121-122; doi:10.1093/nass/nrn062 [Abstract] [PDF] [Request Permissions]  

Sara Miura, Katsuya Ono, Miwa Watanabe, Seiichi Nishizawa, and Norio Teramae
A surface plasmon resonance sensor based on 3,5-diaminopyrazine with a high selectivity for thymine in AP site-containing DNA duplex
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 123-124; doi:10.1093/nass/nrn063 [Abstract] [PDF] [Request Permissions]  

Yoshitaka Miyajima, Takumi Ishizuka, and Makoto Komiyama
Mismatch recognition in PNA double-duplex invasion
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 125-126; doi:10.1093/nass/nrn064 [Abstract] [PDF] [Request Permissions]  

Tsuyoshi Haraguchi, Satoru Shimizu, Xiao Ma, Taizo Kurose, Ella Czarina Magat Juan, Akihiro Ohkubo, Mitsuo Sekine, Takayuki Shibata, Christopher L. Millington, David M. Williams, and Akio Takénaka
Crystal structures of DNA duplexes stabilized by bicyclic-C residues
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 127-128; doi:10.1093/nass/nrn065 [Abstract] [PDF] [Request Permissions]  

Shuichi Hoshika, Fei Chen, Nicole A. Leal, and Steven A. Benner
Self-Avoiding molecular Recognition Systems (SAMRS)
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 129-130; doi:10.1093/nass/nrn066 [Abstract] [PDF] [Request Permissions]  

Pär Nordell, Fredrik Westerlund, Anna Reymer, Bengt Nordén, and Per Lincoln
Finding at-DNA – Kinetic Recognition of Long Adenine-Thymine Stretches by Metal-Ligand Complexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 131-132; doi:10.1093/nass/nrn067 [Abstract] [PDF] [Request Permissions]  

Troels Bundgaard Jensen, Niels Langkjær, and Jesper Wengel
Unlocked nucleic acid (UNA) and UNA derivatives: Thermal denaturation studies
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 133-134; doi:10.1093/nass/nrn068 [Abstract] [PDF] [Request Permissions]  

Pawan K. Sharma, Gerald Enderlin, Surender Kumar, and Poul Nielsen
Synthesis of 3'- and 6'-functionalised Locked Nucleic Acid (LNA) analogues
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 135-136; doi:10.1093/nass/nrn069 [Abstract] [PDF] [Request Permissions]  

Yuko Uchida, Yosuke Taniguchi, Eriko Aoki, Mieko Togo, and Shigeki Sasaki
Formation of a stable triplex incorporating a CG interrupting site by a new WNA derivative containing 3-aminopyrazole as a nucleobase
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 137-138; doi:10.1093/nass/nrn070 [Abstract] [PDF] [Request Permissions]  

Simon P. Scheidegger and Christian J. Leumann
Strand invasion properties and serum stability of {alpha}-tricyclo-DNA
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 139-140; doi:10.1093/nass/nrn071 [Abstract] [PDF] [Request Permissions]  

Takumi Ishizuka and Makoto Komiyama
Single-strand binding protein enhances invasion of a PNA strand to double-stranded DNA
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 141-142; doi:10.1093/nass/nrn072 [Abstract] [PDF] [Request Permissions]  

Yuichiro Aiba and Makoto Komiyama
Introduction of linkers into PNA for versatile applications
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 143-144; doi:10.1093/nass/nrn073 [Abstract] [PDF] [Request Permissions]  

Sachin Gokhale and vaijayanti A. Kumar
Iso-Thioacetamido nucleic acids (isoTANA): Synthesis and DNA binding studies of Lyxo/Ribo oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 145-146; doi:10.1093/nass/nrn074 [Abstract] [PDF] [Request Permissions]  

M. Flaender, G. Sicoli, Th. Fontecave, G. Mathis, C. Saint-Pierre, Y. Boulard, S. Gambarelli, and D. Gasparutto
Site-specific insertion of nitroxide-spin labels into DNA probes by click chemistry for structural analyses by ELDOR spectroscopy
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 147-148; doi:10.1093/nass/nrn075 [Abstract] [PDF] [Request Permissions]  

Nicolai K. Andersen, Lucie Spácilová, Michael D. Jensen, Petr Kocalka, Frank Jensen, and Poul Nielsen
A click chemistry approach towards nucleic acid major groove functionalization
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 149-150; doi:10.1093/nass/nrn076 [Abstract] [PDF] [Request Permissions]  

Mariko Aso, Manami Kurita, John Walter Mirc, Toshiyuki Kaneko, Yoshitaka Higuchi, Noboru Koga, and Hiroshi Suemune
Dynamics of 2-N-tert-Butylaminoxyladenosine Incorporated into Oligodeoxynucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 151-152; doi:10.1093/nass/nrn077 [Abstract] [PDF] [Request Permissions]  

O. Frolow, B. Endeward, O. Schiemann, T. F. Prisner, and J. W. Engels
Nitroxide Spin labeled RNA for long range distance measurements by EPR-PELDOR
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 153-154; doi:10.1093/nass/nrn078 [Abstract] [PDF] [Request Permissions]  

G. Bordeau, E. Faurel, C. Allain, R. Lartia, F. Schmidt, C. Fiorini-Debuisschert, F. Charra, G. Metge, P. Tauc, and M.-P. Teulade-Fichou
New triarylamine-based far-red DNA stainers with high two-photon absorption properties
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 155-156; doi:10.1093/nass/nrn079 [Abstract] [PDF] [Request Permissions]  

Niti Kumar and Souvik Maiti
Role of Molecular Crowding in perturbing Quadruplex-Watson Crick Duplex Equilibrium.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 157-158; doi:10.1093/nass/nrn080 [Abstract] [PDF] [Request Permissions]  

Luigi Xodo, Manikandan Paramasivam, Alexandro Membrino, and Susanna Cogoi
Protein hnRNPA1 binds to a critical G-rich element of KRAS and unwinds G-quadruplex structures: implications in transcription
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 159-160; doi:10.1093/nass/nrn081 [Abstract] [PDF] [Request Permissions]  

Hirotaka Yagi, Tomoko Mashimo, Yuta Sannohe, and Hiroshi Sugiyama
Structural stability analysis of the intermediates in the folding pathway of human telomeric hybrid-1 G-quadruplex based on fragment molecular orbital method
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 161-162; doi:10.1093/nass/nrn082 [Abstract] [PDF] [Request Permissions]  

Hélène Bertrand, Sophie Bombard, David Monchaud, and Marie-Paule Teulade-Fichou
New platinum(II) complexes targeting the loops of the human telomeric G-quadruplex.
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 163-164; doi:10.1093/nass/nrn083 [Abstract] [PDF] [Request Permissions]  

Jussara Amato, Giorgia Oliviero, Nicola Borbone, Stefano D’Errico, Gennaro Piccialli, Patrick Mailliet, Frédéric Rosu, Edwin De Pauw, and Valérie Gabelica
Ligand binding to tetra-end-linked (TGGGGT)4 G-quadruplexes: an electrospray mass spectroscopy study
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 165-166; doi:10.1093/nass/nrn084 [Abstract] [PDF] [Request Permissions]  

Jussara Amato, Valérie Gabelica, Nicola Borbone, Frédéric Rosu, Edwin De Pauw, Giorgia Oliviero, Gennaro Piccialli, and Luciano Mayol
A short C-rich PNA fragment capable to form novel G-quadruplex-PNA complexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 167-168; doi:10.1093/nass/nrn085 [Abstract] [PDF] [Request Permissions]  

Yan Xu, Takashi Kimura, and Makoto Komiyama
Human telomere RNA and DNA form an intermolecular G-quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 169-170; doi:10.1093/nass/nrn086 [Abstract] [PDF] [Request Permissions]  

Yuta Sannohe, Kyosuke Sato, Akimasa Matsugami, Kenichi Shinohara, Tomoko Mashimo, Masato Katahira, and Hiroshi Sugiyama
Orientation of ends of G-quadruplex structure investigated with end-extended oligonucleotides
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 171-172; doi:10.1093/nass/nrn087 [Abstract] [PDF] [Request Permissions]  

Yoshinobu Ishikawa and Satoshi Fujii
Molecular docking study of binding of TMPyP4 to a bimolecular human telomeric G-quadruplex
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 173-174; doi:10.1093/nass/nrn088 [Abstract] [PDF] [Request Permissions]  

Yan Xu, Kuniyuki Kaminaga, and Makoto Komiyama
Human Telomeric RNA in G-quadruplex Structure
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 175-176; doi:10.1093/nass/nrn089 [Abstract] [PDF] [Request Permissions]  

V. Esposito, G. Oliviero, A. Pepe, A. Virgilio, and A. Galeone
Studies on the influence of inversion of polarity sites on the dG residues glycosidic conformation in quadruplex structures
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 177-178; doi:10.1093/nass/nrn090 [Abstract] [PDF] [Request Permissions]  

Akimasa Matsugami, Tsukasa Mashima, Fumiko Nishikawa, Kazuyoshi Murakami, Satoshi Nishikawa, Ken Noda, Takashi Yokoyama, and Masato Katahira
Structural analysis of r(GGA)4 found in RNA aptamer for bovine prion protein
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 179-180; doi:10.1093/nass/nrn091 [Abstract] [PDF] [Request Permissions]  

Kyoko Furuita, Shunpei Murata, JunGoo Jee, Satoshi Ichikawa, Akira Matsuda, and Chojiro Kojima
NMR structural study of DNA oligomers containing alkylene crosslinked cyclic 2'-deoxyuridylate dimers
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 181-182; doi:10.1093/nass/nrn092 [Abstract] [PDF] [Request Permissions]  

Ayako Furukawa, Takashi Nagata, Yuichirou Habu, Ryuichi Sugiyama, Fumiaki Hayashi, Shigeyuki Yokoyama, Hiroshi Takaku, and Masato Katahira
NMR assignments and the identification of the secondary structure of the anti-retroviral cytidine deaminase
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 183-184; doi:10.1093/nass/nrn093 [Abstract] [PDF] [Request Permissions]  

Takashi Mino, Tomoaki Mori, Yasuhiro Aoyama, and Takashi Sera
Inhibition of human papillomavirus replication by using artificial zinc-finger nucleases
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 185-186; doi:10.1093/nass/nrn094 [Abstract] [PDF] [Request Permissions]  

Tomoaki Mori, Jun Sasaki, Yasuhiro Aoyama, and Takashi Sera
Modulation of endogenous VEGF-A expression under hypoxia by using artificial transcription factors
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 187-188; doi:10.1093/nass/nrn095 [Abstract] [PDF] [Request Permissions]  

Yoshihiro Koshino-Kimura, Kosuke Takenaka, Fumiya Domoto, Yasuhiro Aoyama, and Takashi Sera
Generation of plants resistant to tomato yellow leaf curl virus by using artificial zinc-finger proteins
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 189-190; doi:10.1093/nass/nrn096 [Abstract] [PDF] [Request Permissions]  

Anita D. Gunjal, Namrata Erande, Moneesha D'Costa, and Vaijayanti A. Kumar
Synthesis of locked S-type and locked N-type uridine monomer units for incorporation in 2'-5' RNA:3'-5'RNA duplexes
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 191-192; doi:10.1093/nass/nrn097 [Abstract] [PDF] [Request Permissions]  

Takako Ohyama, Ayako Furukawa, Tsukasa Mashima, Takashi Sugiyama, Shouta Ohgara, Toshio Yamazaki, Takao Imai, Hideyuki Okano, Takashi Nagata, and Masato Katahira
Structural analysis of Musashi-RNA complex on the basis of long-range structural information
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 193-194; doi:10.1093/nass/nrn098 [Abstract] [PDF] [Request Permissions]  

Masatora Fukuda, Shun Nakano, Kazuki Tainaka, Nobutaka Fujieda, and Takashi Morii
Construction of a stable functional ribonucleopeptide complex by the covalent linking method
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 195-196; doi:10.1093/nass/nrn099 [Abstract] [PDF] [Request Permissions]  

Tetsuo Kozasa, Yukako Miyakawa, Akira Ono, and Hidetaka Torigoe
The specific interaction between metal cation and mismatch base pair in duplex RNA
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 197-198; doi:10.1093/nass/nrn100 [Abstract] [PDF] [Request Permissions]  

Shun Nakano, Tetsuya Hasegawa, Masatora Fukuda, Nobutaka Fujieda, Kazuki Tainaka, and Takashi Morii
Selective recognition of a tetra-amino-acid motif containing phosphorylated tyrosine residue by ribonucleopeptide
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 199-200; doi:10.1093/nass/nrn101 [Abstract] [PDF] [Request Permissions]  

Kazuki Tainaka, Tetsuya Hasegawa, Masatora Fukuda, Shun Nakano, Nobutaka Fujieda, and Takashi Morii
Development of ribonucleopeptide-based fluorescent sensors for biologically active amines based on the stepwise molding strategy
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 201-202; doi:10.1093/nass/nrn102 [Abstract] [PDF] [Request Permissions]  

Takashi Tokisue, Tomoya Watanabe, Tadayuki Tsujita, Satoshi Nishikawa, Tsunemi Hasegawa, Tsukasa Seya, Misako Matsumoto, and Kotaro Fukuda
Significance of the N-terminal Histidine-rich Region for the Function of the Human Toll-like Receptor 3 Ectodomain
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 203-204; doi:10.1093/nass/nrn103 [Abstract] [PDF] [Request Permissions]  

Kotaro Fukuda, Yohei Toyokawa, Kunio Kikuchi, Keisuke Konno, Rie Ishihara, Chisato Fukazawa, Satoshi Nishikawa, and Tsunemi Hasegawa
Isolation of RNA aptamers specific for the 3' X tail of HCV
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 205-206; doi:10.1093/nass/nrn104 [Abstract] [PDF] [Request Permissions]  

Akihiro Fujimoto, Satoshi Suwa, Yasuhiro Nagai, Yo Kikuchi, and Terumichi Tanaka
Subsites for substrate recognition by bacterial ribonuclease P
NUCLEIC ACIDS SYMP SER (OXF) 2008 52: 207-208; doi:10.1093/nass/nrn105 [Abstract] [PDF] [Request Permissions]  

Satoru Horiya, Chang-Song Koh, Senya Matsufuji, and Kazuo Harada
Analysis of the interaction between selected RNA-binding peptides and a target RNA containing a bulge and a GNRA-typ